Salmo salar (Atlantic salmon): 106613459
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Entry
106613459 CDS
T04363
Name
(RefSeq) uncharacterized LOC106613459
KO
K06260
platelet glycoprotein V
K28877
leucine-rich repeat-containing protein
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106613459
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sasa02000
]
106613459
04090 CD molecules [BR:
sasa04090
]
106613459
Transporters [BR:
sasa02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
106613459
CD molecules [BR:
sasa04090
]
Proteins
106613459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_9
LRR_LRWD1
LRRNT
PRIMA1
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
106613459
NCBI-ProteinID:
XP_014071214
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All DBs
Position
ssa10:complement(10349478..10372385)
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AA seq
1256 aa
AA seq
DB search
MWSVLLFLLVQPLLTDSMVCPSSCMCNLEGAVKCVGNIRDVPKGMPANMYLLQLNGTNMK
VLNEQSLAMLSLMLRLSISHSPLDTIHPEAFHVVPQLLSIKLSSNALSSLPSRVFSPLVS
LEQLHLDDNRLESIAPVLFEGLANLNELDVSNNAIAHLAPNVFHGLSSLRYLNLGRNSLQ
QLPPTLFHSLTRLQFLMLYNNKLERLEVGAFDELANLLELKMHNNQIAHIPPEVFWALGN
LMTLTMSSNQLQGVPNESFYHLPKLTKLTIYKNPLLSLPDKLMGHMPRMKEFYLYATNLN
TVPWSLFANMSGMERLFLHLNNKLRELPPDLFCCLPNLQSLSLKSNDIQDLHPDIFSKLA
NMNTLLLNDNKLRSLSEDIFKGNPSLASIELKNNQLRTLPGEVFSTAGGVRVVTLSGNPW
DCRCGIRDIASWIKLNEGVVSDWTDVICRNPHPLLLRPLGSLLDEEFTCDFTTPSSSRTT
HTSIELIHVVSNTALEEIEAVEFTPTTTAPEAPSTQQTENPTESVRFTTSGFRRTTDATP
TADILDILDDDYIFKPMGTESLPVHVLSPPFHDRVVFENGLEFVHNNRLKGWVYLWTLPP
NGTYVGFLMALHILLVATGMALILAAIYGMYRLHQAMEDLGAILTNRKHTIISERKQKDQ
DKLYSRSFEQQEQRMILSGGEDRASMDLPIDLLIFLLLLAISGVLGACPDGCQCKDNKIL
CHGRSITEFPSSVPGSTTTFYISNTNITALKPDDLAGFAEALGIFVVKDTGIREVFPGTF
DLTRNLGALGFTGTELNDLPEALFVNLVKLESLTLSGNKLLVLRPAWLYSLAALRTLDFS
KNLITSVPEKAFRSVTQLEHLTLARNGINQLYRDTFRGLSKIKSLRLNRNALRAIPAGAF
DDLVSLEELSLQDNAITHLPANLFSQLQSLKKLYLSSNRLTSLPEGILLNLPNLAQISLY
ENELQSLSPGVFGPMAVRELWLYDNRLTHLEEHTFSNLTQLRLLVLSRNQISSVSPGAFS
GLAELGEVSLHTNLLTSLQEGTFQGLHKLVNISLENNYIHSLPARLLHGHSHLGQLDLHN
NSLLNLPSELLSTLTVANEVLLAENPWKCDQDIVPLRDWLTRNPTKANLSTVVCLTPSVL
SGDSIAELTDEELMLSTPTAVPDTTPTEKRRKPHTPAPKRSTPSPAAEATPTQEQGEDTS
SGQGNGEGVSRNTQIIIIAVVCTAIITSLIVCCVCWRRNNRGSRNLGHRNKNNSVI
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcgtattactctttctcctggtccagcctttgctcaccgacagcatggtctgc
cctagcagctgcatgtgcaacctagagggggccgtcaaatgtgtgggaaacatcagggac
gtgcccaaaggcatgcccgccaacatgtacctacttcagctgaatggcaccaacatgaag
gttctgaacgaacagagtctggccatgttgtcccttatgctgcgtttaagcatcagccac
agccccctggacaccatccaccctgaggccttccatgtggtcccgcagctcctctccatc
aagctgtcatccaacgccctctccagcctcccttcccgggtgttcagccccttggtcagc
ctggagcagctgcatctggatgacaatcgtctggagtccatcgctcccgtgttgtttgag
ggtctggccaacctgaacgaattggacgtcagtaacaacgccatcgctcacctcgccccc
aatgttttccacggactgagtagcctgcgctatctcaacctggggagaaactccctgcag
caactgccccccaccttgttccactcattgacacggctgcagttcctcatgctctacaac
aacaagctagagcggctggaggtaggcgccttcgatgagctggccaacctcctggagctc
aaaatgcacaacaaccaaattgcccacatcccccccgaggtgttctgggccctaggcaac
ctcatgaccctcaccatgtcctccaaccagctccagggtgtcccgaatgaaagcttctac
caccttcccaaactcaccaagctcaccatctacaaaaaccctctgctgtcactgcctgat
aagttgatgggccacatgcccaggatgaaggaattctacctgtatgccaccaacctcaac
accgtgccctggagcctgtttgccaacatgagcgggatggagaggctcttcctgcacctc
aacaacaagctgagggagctgccccctgacctcttttgctgccttcccaacctccagagt
ctttccctcaagtccaacgacatccaggatctacatccagatatcttctccaagctggcc
aatatgaacactctgctcctgaatgacaacaagctccgctccctttctgaggacatattt
aagggcaaccccagtttggccagcatcgagctgaagaacaaccagctgcggacccttccg
ggggaggtcttctctactgcagggggtgtaagggttgttactctgagtggcaacccatgg
gactgcaggtgtggcatcagagacattgcaagttggataaagcttaatgaaggcgtggtt
agtgattggacagatgtgatatgtcgtaatccgcaccctctacttctccgcccacttggt
tccctactcgacgaagagtttacgtgtgactttaccacaccctcgagcagccgcaccacc
cacacttcgattgaactcatccatgttgtttccaatacagctcttgaggagatagaggct
gtagaattcacacccacaactactgcacccgaggctccatcaacccaacaaacagaaaat
cctactgagagtgtcaggttcaccacatctgggtttaggcgcacaacagatgctacaccg
accgccgacattctcgacattcttgacgacgactatatattcaagcctatgggcaccgaa
tcgctccccgtccatgtcctatcaccgcccttccacgacagggtggtgtttgagaacggg
ctcgagtttgtgcacaacaaccgcctaaagggctgggtttacctgtggacgctgccaccc
aatgggacttacgttgggttcctcatggctctccatatccttctagtggccacaggcatg
gccctgattctggctgccatttacgggatgtaccgtctccaccaggccatggaagaccta
ggagcaatactcacaaacaggaaacacaccatcatatcagagaggaagcagaaagaccaa
gataaactgtatagtaggagctttgaacaacaggaacaaagaatgatcctctcaggggga
gaggacagagcatcaatggatctgccaatcgacctcctcatctttctcctcctccttgcc
atcagtggagttcttggagcgtgcccagatggatgccagtgcaaagacaacaaaatcctt
tgccatggcaggtcaatcacagagtttccctcctcagtgcctggttccactaccaccttc
tacatctccaacaccaacatcaccgctctcaaacctgatgacttggctggttttgccgag
gcccttggcatctttgtcgtcaaagacactgggatcagagaagtattccctggcaccttt
gacctcacccgtaacttgggtgccctgggcttcaccggcactgagctgaatgacctgcct
gaggccttgtttgtaaatctggtgaagctggaatctctgactctgagcggcaacaagctc
ctggtgcttcgccccgcctggctttactccctcgctgctctgaggaccctggacttcagc
aagaacctcatcacgtctgtaccagagaaggcctttcgctctgtcactcagctggagcat
ctcaccctggccaggaacggcatcaaccaactctacagggacaccttcaggggcctgagc
aagatcaaatccctgcgtctgaaccggaacgctcttagggcgatccctgctggagcgttt
gatgacctggtaagcctggaggagctctctctacaggataatgccatcactcatctcccc
gctaacctgttctcccagctgcagagcctaaagaagctttatctctccagcaaccggctg
acttccctcccagagggaattctcctcaacctccctaacctggcccagatctcactgtat
gagaacgagctccagagtctgtccccaggagtgttcggccccatggccgtgagggagctg
tggctgtatgacaaccggctgacccacctggaggaacacaccttcagcaacctgacccag
ctgcgtctgctggtactgagccggaaccagatcagctctgtgtctcccggggccttcagt
gggctggcagagctgggggaagtgtccctacacaccaacctcctcaccagcctgcaggaa
ggcaccttccaggggctgcataagctggtaaacatctccctggagaacaactacatccac
tcccttcctgccaggcttctccatggccactcccaccttggccaactggacctccacaac
aactccctcctcaacctgccctcagagctcctcagcaccctcacggtggccaatgaggtg
ctgctcgctgaaaatccctggaagtgtgaccaggacatcgtgccactgcgggactggctg
acacggaaccccaccaaggctaacctcagtactgtggtgtgcctcacgccctctgtctta
agcggtgacagcatagccgaactgactgacgaggagctgatgctgtccactccgaccgcc
gtccctgataccaccccgacagagaagagaaggaagccccacacccccgctcccaagagg
agcaccccctcccctgctgcagaggccacgcccacccaggagcagggggaggacaccagc
agtgggcaggggaacggagagggcgtgtccaggaatacgcagatcattatcatcgcggtg
gtctgcaccgccatcatcaccagtctcatcgtctgctgcgtctgctggaggaggaacaac
agaggcagccgcaaccttggccacaggaacaaaaacaactcggtcatctag
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