Salmo salar (Atlantic salmon): 106613614
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Entry
106613614 CDS
T04363
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16-like
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106613614
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
106613614
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_IFT140_1st
WD40_WDHD1_1st
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
106613614
NCBI-ProteinID:
XP_014071529
UniProt:
A0A1S3T4K4
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Position
ssa10:complement(14298333..14315066)
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AA seq
835 aa
AA seq
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MMEVAYVCEWEKRPKSNHCPSIPLVCAWSCRNLVAFTTDLKNEEDEKEVSHMVHIIDTEH
PWDVYSIYSGHAEVISCLEWDQSGSRLLSADGDGQIKCWAMADHLVNSWETSLGSAVDGD
PIIALSWLHNGVKLALHVEMSGSTNFGEKFSRVKFSPSLTLFGGKPMEGWLAVTVSGLVT
VSLLKPNGQLLTASESLCRLRGRVSLADIAFTGGGNIVVAATDGSSSSPVQFYKVCVSVV
NEKCRIDTELLPSLFMRCTTDPVRRDKYPAVTHLKFLTRENSEQVLLCASSQTGSIVECW
SLRKEGLPVNNIFQHRSPVVGEKQPMILKWRILSATNDLDRVSAVALPKLPISISNPDLK
VASDTKFCPGLGLALAFHDGSIQILHRLSLHTMGVFYGSSSGSSQRPGEEPAIKRQRAGG
HTVHFKALQFSWTSLALAGVDNHGKLHMIRVSPSMGQMLDMNTLLRHLLFLLEYCMVTGY
DWWDVLLHVQPGMVHNLVEKLHEEYMRQNQALQQVLSTRIVAVKASLCKLSAATAARACD
FHAKLLLIAISATLKSLLRPHVLNTPDKSPGDRLAEICAKNTDTDIDKVMINLKTEEFVL
DGPPLQSLQQLIQWVGDFVLYLMANLPNQGSIVRPGFGFLRDGSSLGMLREMMVMIRIWG
LLKPGCLPIYTATSDNQDSMSLLFRLLTKLWLCSRDEGHPQEPDEPLIDECCLLPSQLLV
PSMDWLPVNDGIICKLQGKQPLRLQFGKPYSLPGLNSTAQVEIFSRSPGAQRMDNLRCLH
MGVCPTEESKACTRCGCVTMLRSPNKTNAMKQWEQRWIKNCLCGGLWRRILSTLS
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagtggcctatgtttgtgagtgggagaagagacccaagagcaaccactgtcca
tccatcccactggtgtgtgcctggtcctgcaggaacctagttgcctttaccacagaccta
aaaaatgaggaagatgagaaagaagtcagtcatatggtccacatcatagacacagagcac
ccatgggatgtgtactccatttactctggacatgccgaggtcatatcctgtctggagtgg
gaccaatcaggttccagattgctgtctgctgatggagacgggcagatcaagtgctgggcg
atggcagatcacctggtgaacagctgggagacttcactagggagtgcagtggacggagac
cctatcatagctctgtcctggctgcataatggagtcaagctggctctgcatgtggagatg
tcgggctccaccaactttggggagaagttttcacgggtcaagttctcgccgtctctcaca
ctgttcgggggtaagcccatggaaggttggctggcagtgactgtgagcggcctggtcacg
gtgtccttgctgaagcccaacggtcagctgctgacagccagcgagagcctgtgtcgcctg
aggggccgtgtttccctagccgacatcgccttcactggcgggggcaacatcgtggtggcg
gcaacggacggcagtagctcctcacctgtgcagttctacaaggtgtgcgtgagcgtggtc
aacgagaagtgtcgcatcgacacggagctgctgccctcgctctttatgcgctgcaccaca
gacccggtcaggagggacaagtacccggccgtcacacacctcaagttcctcaccagggag
aactcagagcaggtgctgttgtgtgcctccagtcagacgggcagcatcgtagagtgctgg
tcactgcgaaaagaaggcctccctgttaataacatattccagcatcgctcaccagtagtg
ggtgagaaacagccgatgatcttgaaatggcgcatcctctcagccaccaatgacctggac
cgcgtgtcggccgttgctctgcccaagctgcccatctccatctccaaccctgacttaaag
gtggcgtcggacacaaagttctgcccaggcctcggcctggccctagccttccacgatggc
agcatccagatcctccaccggctgtccctccacactatgggcgtgttctatggctcctcc
tcgggctcctcccagcggcccggggaagagccggccatcaagcggcagcgtgccggcggc
cacaccgtccacttcaaggccctgcagttctcctggacctcgctggccctggccggagtg
gacaaccatggcaagctgcacatgatccgtgtgtctccctccatgggccagatgttggac
atgaacacactgctgcgccacctgctgttcctgctggagtactgcatggtgacaggctac
gactggtgggatgtgctgctccacgtgcagcccggcatggtccataacctggtggagaag
cttcatgaagagtacatgagacagaaccaagccctgcagcaggtgctctcgacacgcatc
gtcgcagtgaaggcctctctctgtaagctgtcggcggctacggcggcgcgagcctgcgac
ttccacgccaagctcctccttatcgccattagcgccaccctcaagtccctgctgaggccc
cacgtcctcaacacgccagacaagagccccggggataggctggcagagatatgcgccaaa
aatactgacactgatatcgataaggtgatgatcaacctgaagacagaggagtttgtgctg
gacggccccccgctccagtctctgcagcagctcatccaatgggtgggagactttgtgctc
tatctgatggctaacctacccaatcagggctccatcgtgcgtcccggctttgggttcctg
cgcgacggctcgtccctgggcatgctgcgtgaaatgatggtgatgatccggatctggggc
ctgctgaagcctggctgcctgcccatctacacggccacctcggacaaccaggacagcatg
tcgctcctcttccgcctgctcaccaagctctggctctgctctcgggacgaaggccacccc
caggagcctgatgagccactgatagacgagtgctgcctgctgcccagccagctgctggtg
cccagcatggactggctgcccgtcaacgacggcatcatctgcaagctgcagggcaagcaa
ccgctgcggctgcagtttggcaagccctacagccttccgggtctcaactccaccgcccag
gtggagatcttctctaggagcccaggggcccagaggatggataatctacgttgtctccac
atgggagtctgccccacagaggagagcaaagcctgcacccggtgtggctgtgtgaccatg
ctccgctcgcccaacaagaccaacgcaatgaagcagtgggagcaacgctggatcaagaac
tgcctgtgcggaggcctctggagaaggattctctccacactgtcctga
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