Salmo salar (Atlantic salmon): 106613616
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Entry
106613616 CDS
T04363
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B-like
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04020
Calcium signaling pathway
sasa04080
Neuroactive ligand-receptor interaction
sasa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
106613616
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106613616
04082 Neuroactive ligand signaling
106613616
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106613616
Ion channels [BR:
sasa04040
]
Ligand-gated channels
Glutamate (ionotropic)
106613616
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
106613616
NCBI-ProteinID:
XP_014071536
UniProt:
A0A1S3T4L4
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Position
ssa10:complement(14331679..14443144)
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AA seq
1163 aa
AA seq
DB search
MNLIFSRFLAYFYFGFQVILQFFIDPCQLHPQPCHILAQIGHTVRLGALLPTRQPARVQA
ALNRALTGLVQTGDNFLPYNLSLEVVPREPANGDPESLFRCVCQAIVVQGVSAVLAFPQT
QEEIVQVEFMASFLEIPFISIIEHGEPLKTQNRFHLQMVTQIPPSGLSELLLTILQRSGW
QEGMAVLCQGWEEAGLLELLELQSRLGWGATRWHLRALLNLTRAGPTESEIQDFLSEHFR
GQGPSQILPPAAVLLFGADPECAAAVLRSAQDLGLTLPTVHWVLGYPLSPDTLHSIGLPL
GLLAYGEVERKPLDFYIRDALQLVGQAVAAATVVRPDLALIQNMVNCYDKPNKHEVPSSG
QYLARFLSNTSFSGLTGPVSVQRNLSRVLTSQRFHIWSLRRDAVGQPTWVTVGSWEGGRL
KVEDQSLWQGPNGKGHDRGEGQRSGGRWQPGMPVADSRVRVVTLVEHPFVFTREVDEDGN
CPAGQYCLDAGTNSSDMLESYFSERASGNSTFLPTDFSKCCYGYCIDLLEKLAEDLRFEY
DLYIVGDGKYGASKSGRWTGLVGDLLNGVADMAVTSFSINSVRSRVIDFTSPFFSTSLGI
LVRSKDTAAPIGAFMWPLHWSMWVGIFVALHITALFLTLYEWKSPFGMTPHGRNRLRVFS
YSSALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFE
ELSGIHDAKLHHPSHGFRFGTVRESSAEEYMKKSFPEMHEYMRRYNEPTTPDGVSTLKVD
PPQLDAFIMDKALLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQNSPLTNNVSEFISRYK
SDGYMDMLHDKWYKVVPCGKRVFAVTETLQMGIRHFSGLFVLLCVGVATSLLTLAGEHAF
YHMVLPRIRRRQKYKYWLHTSQKIHRALNQTYEDVKKKQDTNTEKSSCCLQKNQHPQPPP
DPLLSKASAKWNNENSRDSSAAAAKDNKRVHFNLETLNSRRLLARAVTKSEGGRGGEGIP
GANQATRVCANGGFGTSFANLVLSLPSSSSSSIPSSSSLGVPPRPGELQELQEKIDLIRD
QLRTALARRAELQTSLAKEKAACSAPIVSGTPPVVLAAASLPTSTKTTSSLPSTRCATTM
TDPVLKALPTVRTAPAKHTNEKR
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaatcttctcaagattcttggcatacttttacttcggattccaagttatttta
cagttcttcatcgacccttgtcaactccatccccagccgtgccacattctggcgcagata
ggacacaccgtgcgccttggtgcccttctgcccacccgccagccggccagagtgcaggct
gccttgaaccgcgccctcaccggtctcgttcaaactggggacaactttctaccttacaac
ctgagcctggaagtggttcctcgagagccggccaacggagacccggagtcccttttcagg
tgtgtttgtcaggctatcgttgttcagggggtctccgctgttctcgccttcccccagacc
caggaagagatcgtacaagtggaatttatggcttcttttttggaaatcccttttataagc
atcattgaacacggagagcctctgaaaacacagaaccgcttccacttgcagatggttacg
cagatccccccgtcaggcctgtcagagctgctgctgactatcctccagcggagcggctgg
caggagggtatggctgtgctgtgccagggctgggaggaggctggcctgctggaactactg
gagctccagagccgccttggctggggcgccacccgctggcacctccgagccctcctcaac
ctcacccgggccggacccacagaatccgaaatccaggacttcctttcggaacacttccgg
gggcaggggccaagtcagatcctgccaccggccgcggtgctgctgttcggggccgacccg
gagtgtgcagcggcggtgctgcggagtgcccaggacttggggcttacgctgcccacagtg
cactgggtgctgggctacccgctgagccccgacaccctgcactccatcggcctgcccctg
gggctgctagcctacggtgaggtggagcgcaagccgctggacttctacatccgcgacgcg
ctgcagctggtgggccaagctgtggcagcagccacagtggtgcgtcccgacctggcgctc
atccagaacatggtcaactgctacgacaagcccaacaagcacgaggtgccatcgtccgga
cagtacctcgccagattcctgtctaacacgtcgttctcagggctgacagggccggtgtcg
gtgcagaggaacctgtcgcgggttctcacctctcagcgcttccacatctggagcctgcgg
cgggatgcggtgggccagcccacctgggtgacggtgggcagctgggaggggggccgcctg
aaggtggaggaccagagcctttggcagggtcccaatggcaagggccacgaccggggggag
ggccagaggagtgggggccggtggcagccaggcatgcctgtggcagacagccgggtgcgg
gtagttaccctggtggagcacccctttgtattcacgcgggaagtcgatgaggacgggaac
tgcccggcgggacagtactgcctggacgcagggacgaacagctcggacatgctggagagc
tacttcagcgagcgtgcctcgggaaactctaccttcctacccacggacttcagtaagtgt
tgctacggatactgcattgacctgctggagaaactggccgaggacttgcgctttgagtac
gacctgtacatcgtgggtgacgggaagtatggagcgtcgaagagcggccgctggacaggg
ctggtgggtgacctgctcaatggcgtggctgacatggccgtcacctcattcagcattaac
tcagtgcgtagccgcgtcatcgacttcacctcgcccttcttctccacctcgctaggcatc
ctggtgcgcagcaaggacacagcggcgcccattggcgccttcatgtggccccttcactgg
tccatgtgggtgggtatcttcgtggcactgcacatcaccgccctcttcctcaccctctac
gagtggaaaagcccttttggcatgacgccacacggacgcaaccgcctgcgggtcttctcc
tactcgtcagcgctcaacctgtgctacgccatcctgttcggccgcacggtctccagcaag
actcctaagtgctggacgggtcggtttcttatgaacctgtgggccatcttctgcctgctg
gtgctgtccagctatacagccaacctggccgccgtcatggtcggcgagaagaccttcgag
gagctctcggggatccacgacgccaagctccaccacccgtcccatggtttcaggtttggg
acggtgagggagagcagtgccgaggagtacatgaagaagagtttcccagagatgcacgag
tacatgaggcgctacaatgagcccaccacacctgatggagtgtccaccctcaaggtagat
ccccctcagcttgatgccttcatcatggacaaggccctgctggactacgaggtgtccatc
gacgcagactgcaagctgctcaccgtgggcaaacccttcgccatcgaaggctatggaata
ggcctaccgcagaactcccctctgaccaacaacgtgtcagagttcatcagtcgctacaag
tcagacggctacatggacatgctgcacgacaagtggtacaaggtggtgccctgtgggaag
agggtgttcgccgtcaccgagactctccagatgggcattcgtcacttctcagggctgttt
gtgctgctgtgtgtgggcgtggccacgtcgctgctcaccctggctggggagcacgccttc
taccacatggtgctgccccgcatccgacgacgacaaaagtacaagtactggctccacacc
agccagaaaatccaccgagccctgaaccagacctatgaggacgtgaagaagaagcaggac
accaacacagagaaaagtagctgctgcctccagaagaaccagcacccccagcctccccct
gacccccttctctccaaggcatcggccaagtggaacaacgagaacagcagggactcctct
gctgcagccgctaaggacaacaagcgtgtccactttaacctggagaccctcaacagccgc
cgcctgctagcccgggccgtgaccaagtccgaaggggggagagggggggaaggtatcccc
ggggctaaccaggcaacacgtgtctgcgcaaacggaggcttcgggacttcctttgccaac
ctggtgctctccctcccctcctcctcttcttcatccatcccttcatcttcctccttgggc
gttcctccaaggccaggggagctacaagagctacaggagaagatcgacctgatccgggat
cagctaaggacggctctggccaggagggctgagctgcagacttccctggccaaggagaag
gccgcctgctctgcacccatagtgtcaggaacgccccccgtggttttagccgcagcatcc
ctccccacctccaccaaaaccacctcgtccctcccttccacccgctgtgccaccaccatg
acagaccctgtcctcaaggccctgcccacagtccgcacagcccccgccaaacacaccaac
gagaagaggtga
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