Salmo salar (Atlantic salmon): 106613619
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Entry
106613619 CDS
T04363
Name
(RefSeq) WD repeat-containing protein 18
KO
K14829
pre-rRNA-processing protein IPI3
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sasa03009
]
106613619
Ribosome biogenesis [BR:
sasa03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
106613619
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_alt
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_VPS8
Ge1_WD40
WDR54
Motif
Other DBs
NCBI-GeneID:
106613619
NCBI-ProteinID:
XP_014071545
UniProt:
A0A1S3T4M3
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Position
ssa10:complement(14451633..14549014)
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AA seq
431 aa
AA seq
DB search
MSAPIEIVLSTDSAGQLWNCAVLELHSGANLLAYRGGNTSSRSLTVLNGEYILGAQLGKN
FINVWEIQRKDQLQQKIVCPGIVTCLTASPNGLYLVAGIADAIYLWEVSSGNLLAILSRH
YQDLTCLRFSDDSSHFISGGKDNLALVWSLASVVQLDPSHTPEPRHVLSRHSLPITDIHC
GLMGPQARVATASLDQTVKLWELSSGEMLLSVLFDVGIMSVTLDPCEYYLFCGGSDGGIF
QVSLCSQSLSRDKTFQSDNEGNQVFKGHRNLVTCLSVSMDGTLLLSGSHDETIRLWDIQS
KQSIRSINNKGPVTNALIIPAPANMFLPDSRPGILLPRFSRHLNPSEQGEGVETGGVCLR
LAPHTQAQKETYLEKADKLYSIMSAVTDKSVFGDGENTKVRVSELEEEVRTLKKVNKDLY
DFSTQLLTKPS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcctattgaaatagttctgagtaccgattcggctggacagctatggaactgt
gccgttctggaactccattctggtgcaaatctcttggcctatcgaggtggcaatacttct
tcgaggtcactcacagttttgaatggagagtacatcctcggagcccaactcgggaaaaac
ttcatcaacgtgtgggaaatccagagaaaggatcagctgcagcagaaaattgtgtgccct
gggattgtgacatgcctgactgcatcccccaatggcctgtacttggtggcaggcattgct
gatgccatctacttatgggaggtttcctctgggaatttgctggccatcttgagccgccat
taccaagacctgacctgcctgcgcttcagtgacgacagcagccatttcatctcaggaggc
aaagacaacctggcactggtctggagtctagccagtgtggtgcagctggacccgtcacac
acccctgagcctcgtcatgtcctgtcccgtcactctctccccatcaccgacatccactgt
ggcctgatgggaccccaggctcgagtagctactgcatccctggaccagacagtcaagcta
tgggagctatcctctggcgagatgctcctgtctgttctttttgacgtgggcatcatgtca
gtgacccttgacccctgcgagtactacctcttctgcggtggcagtgacggcggtatattt
caggtgtccctctgtagccagagcttaagtcgggataagacgttccagtcggacaacgag
ggcaaccaggtttttaaaggacacaggaacctagtgacatgtctgtctgtctctatggat
ggcactctcctcctctcgggctcccacgatgagaccatacgactgtgggacatccagagc
aagcagagcattcgcagcatcaacaacaaaggtccagtcacaaatgccctcatcatccct
gcccctgccaacatgttcctgcctgacagccgcccgggcatcctcctgccccgcttcagc
cgccacctcaacccctcagaacagggcgagggcgtggagaccggaggagtgtgcctgcgc
ctggccccccacacccaggcccagaaggagacctatttggagaaagcagacaaactctac
tccatcatgagtgccgtaacagacaagagtgtgtttggtgatggtgagaacaccaaggtg
cgtgtgtcggagctggaggaggaagtgagaacgctgaagaaggttaacaaggacctgtac
gacttctccacacagctcctcaccaagcccagctag
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