KEGG   Salmo salar (Atlantic salmon): 106613625
Entry
106613625         CDS       T04363                                 
Symbol
UBIQ, Ubiquitin
Name
(RefSeq) ubiquitin-60S ribosomal protein L40-like
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03010  Ribosome
sasa04120  Ubiquitin mediated proteolysis
sasa04137  Mitophagy - animal
sasa04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    106613625 (UBIQ)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106613625 (UBIQ)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    106613625 (UBIQ)
   04137 Mitophagy - animal
    106613625 (UBIQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:sasa03011]
    106613625 (UBIQ)
   04121 Ubiquitin system [BR:sasa04121]
    106613625 (UBIQ)
Ribosome [BR:sasa03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    106613625 (UBIQ)
  Archaea
    106613625 (UBIQ)
Ubiquitin system [BR:sasa04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   106613625 (UBIQ)
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5 zf-C4pol OTU1_UBXL Dsc3_N UBL_UBAC1
Other DBs
NCBI-GeneID: 106613625
NCBI-ProteinID: XP_014071549
UniProt: B5DGL2
LinkDB
Position
ssa10:14713116..14715167
AA seq 128 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTSN
LRPKKKLK
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaagacgttgacggggaaaaccatcacccttgaggttgagcccagc
gatactattgaaaatgtcaaggccaagatccaggataaggaaggtattcctccagaccag
cagcggctgatcttcgctggaaaacagcttgaagatggtcgcaccttgtcagactacaac
atccagaaagagtccactctgcatcttgtgctgcgtctgcgtggaggcatcattgagcca
tctctgagacagctggcccagaagtacaactgcgacaaaatgatctgccgcaagtgctac
gctcgcctccatcctcgtgctgtcaactgccgcaagaagaagtgtggacacaccagcaac
ctgcgccccaagaagaagctgaagtaa

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