Salmo salar (Atlantic salmon): 106613671
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Entry
106613671 CDS
T04363
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sasa03016
]
106613671
03036 Chromosome and associated proteins [BR:
sasa03036
]
106613671
Enzymes [BR:
sasa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
106613671
Transfer RNA biogenesis [BR:
sasa03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
106613671
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106613671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TARBP1
Motif
Other DBs
NCBI-GeneID:
106613671
NCBI-ProteinID:
XP_014071656
UniProt:
A0A1S3T4Y5
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Position
ssa01:complement(100221422..100227580)
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AA seq
859 aa
AA seq
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MSSILINALLSSCHDRDTLFNTLCWTTDSWPDTERVEALTTFIDGIGKLPQSDDGDKVAF
STAKRDIFLRKVESIIWTQCLPLLLKVSDGDGACKGKSVQDGRAEITNAVCRLLSVCINT
LCDTAVSGRVARTVLPSFQLTDGETEEEHPGQGEGRLGIDVAIEAMSVILPTLSSNEELT
TSILSSALSCIKTLSDALVSKITVRLIFTLLNSYSEDRIASTLQFILQDLCSWHKSDSSN
TTSPVVTGRTLLCFTALSDYLFSPAKLQQHTLPQSLSCTRPDPRRSLQFWRILQDGLTHR
DNVSRKRALYLLKRCVALSEDEALEFPSSSVSSEDNEEIIFRWAPDRSKLLREFWEDYAL
VMETLEENQIHVVRPVLNRIHTLIQTAANDSQGVSLFHPSWLLGVYQRMFHSENKSVMRE
GVDHLLELQVLRRPAFAQAFSQFIVGPFMDVMSESSLFHRTAGQSVGECPELGVKLQVFM
VTFFSSLPQENRGPVLLQLVQRLGSQHWCAVPVLFLSRALSHLPPCPLLGPDGLQALREV
LRCTMITHQVLLRGAAQCFLLNSTLSLTDVTSVTLDDVFSLLVHFRADESLPRGTPLWNQ
LCDWLADSEGSFIPCDRESADGTSTSPERETVRGYVQHQMEFFLRVPAGADQTDSVPDPG
EAELLAKAILLCVDIEGRTQRRSGGEETAGVSGGMDSLFRPLLDTLSRLHTNVYLPLRKT
DKSLQLLLRLLQLTPARHPAAVEKEQEDSVTVSMEMLVLGVVEPIQEFILRRLSGELQEL
CDVERAELYLSVLKEVVLMYSVLEWNHSKVQEAYFPRLLRYVLRILEADQVQYYRIYLLS
LRLLSFTSHFIHHWIHVSV
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctattttaatcaatgcccttttatcaagttgccatgatcgggatactttgttt
aacacgttgtgctggacaactgactcgtggccggacacagaaagagtagaggcactgaca
acgttcattgatggaattggtaaactaccccagtctgacgatggcgacaaagttgccttt
tcaactgcaaaaagagacatctttctacgaaaagttgaatcgatcatttggacacaatgt
ttaccacttctcttgaaagtctctgacggagacggggcatgcaaaggtaaaagtgtgcaa
gatggaagggctgaaatcaccaacgctgtgtgcaggcttctgtctgtctgcatcaacacc
ctgtgtgacacggcagtttctgggcgagtcgcccgcactgtcctgccatccttccagctg
acagacggggagacagaggaagagcatcccggccagggtgaggggcggctgggtatcgac
gtggctatcgaagccatgtcagtcatcctacccactctctcatccaacgaagaattgacc
acgtcgatcctctcatctgccctgtcctgtatcaagacgttatcggatgctctggtctcc
aaaatcaccgttcggcttattttcactctcctcaacagctacagcgaggataggatagcg
agtacactccagttcattttacaggatttgtgtagctggcacaagagtgacagctcaaac
acaacctcacctgtggtgacaggacgcactttgctgtgttttacagctctctcggactat
ctcttctctccggctaaactacagcaacacacccttcctcaaagtctgagctgtactcga
ccagaccctcgtagatctttgcagttctggaggattctacaagatggactgacgcacaga
gacaacgtgtcccggaagcgagcgttgtacctgctgaaaaggtgtgtcgctctgtcagag
gatgaggcgcttgagtttccaagcagttcagtgtcaagtgaagataatgaggagatcata
ttcagatgggccccagacagaagcaagctgctcagagagttctgggaggactatgccttg
gttatggagacactggaggagaaccagattcatgtggtccgccctgtgctcaacagaatc
catacattgatccaaacagcagcgaatgatagtcaaggcgtcagtctgttccacccgtca
tggctgctgggtgtgtaccagcgtatgttccacagtgagaacaagtccgtcatgagagag
ggagtggatcacctgctggaactccaggtgctccgacgccctgccttcgcccaggccttc
tcacagtttattgtgggcccttttatggatgtgatgtctgaaagctccctctttcacagg
actgcaggacagagtgtaggagagtgtcctgagctgggagtcaagctgcaggtcttcatg
gtcacgttcttcagcagcctgccacaggagaacagaggtcctgtgttgctgcagcttgtc
cagcggctaggttctcaacactggtgtgctgtccccgtcctctttctctctcgggcccta
tcccaccttcctccctgccctctcctgggccctgacggcctgcaagctctcagggaggtg
ctccgctgcactatgatcacccaccaggtgctactgagaggagctgcccagtgtttcctg
ctaaacagtaccctctccctgacagatgtgacctcagtgacgttggatgatgtgtttagt
ttgctggtgcatttcagagcagacgagtctctacctagaggaacaccgctctggaatcag
ctgtgtgactggctggctgacagtgaaggcagcttcataccctgtgacagagaatcagct
gatggtaccagtacttctccagagagggaaactgtgagaggctacgtccaacaccagatg
gagttcttcctcagagtcccggctggcgcagaccagacagacagtgtaccagacccagga
gaggcagagctgctagccaaggccatcctactgtgtgttgacatagaggggaggactcag
aggagatctggaggagaggagactgctggtgtcagcggtgggatggactcgctcttccgc
cccctactggacacactgagcaggctccacactaatgtctacctgccgctacgcaagact
gacaagagcctgcagctgctgctacgactactgcagctcacaccagccaggcaccctgct
gcagtagagaaagaacaagaggacagtgtgacggtctccatggaaatgctggttctgggc
gtggtggagcccattcaggagttcatcctccgaagactgagtggagaactgcaggagcta
tgtgatgtagagcgtgctgagctctacctgtcagtgctgaaagaggtggtgctgatgtac
agtgtgttagagtggaaccactccaaggtacaggaggcctatttccccagactcctcaga
tacgtcctgaggatcctagaagctgaccaggtacagtattacaggatctatctcctctct
ctcaggctgctctccttcactagtcacttcatacatcactggattcatgtgtcagtttga
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