Salmo salar (Atlantic salmon): 106613752
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Entry
106613752 CDS
T04363
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial-like
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sasa03029
]
106613752
Enzymes [BR:
sasa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106613752
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
106613752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_3
PPR_2
Motif
Other DBs
NCBI-GeneID:
106613752
NCBI-ProteinID:
XP_014071802
UniProt:
A0A1S3T5D9
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All DBs
Position
ssa10:complement(19207834..19298135)
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AA seq
1339 aa
AA seq
DB search
MSLLRLCTFPKCLSGRILLEISVRRVPYADHCLTIRNNIERHISEPPWTSQRRHFSALIP
KKEDGEKRVWEQSQLLDVLEARIQQLQSDVIVDVQHEKVQFVKASKSGIGASSGNSPKNV
SGERNEVPKAGQIISKGGGQTGKGEGKDASASKSRWMEKLSQEKKTKTKKLKQKLGLEDK
PVKSSKGKLMLPGTSHKTISTKAGIKTASTVKKSKTLKNQEHTVAASKHEHTMAAAPVAA
ANVPIRKAKGKGKASKEPAPELSKARNRAEELERKDEAKARELAEVEELERKLNQWAVSA
SPELVQDNSEARVYGDIQRSVRCYLEACVFCGEIDRAHRFLLSHHRMASRRNLLNIGLYN
IMMRVWAKKGSLNQIGRMFILVEEAGLKPNLGSYCAALECMGRNPDCSPHVINRVLRQME
EDGLPVDELFSHCVFRQDERDMVLRAIHTVQPDFQPSINTILQTCSSPLVKDFYTERADA
KYPKMAFSLEELRERFSRQLSIEQASTITIHSVEAMKPVTSHMAKMRDLLAVQRLVWHKA
LVGALRDSKMILASSTQKATRLSLYPYLCLLDEKDYVDIMIQSLSNLPPSGESLHILAKE
LGNRVHNKFCIRMKEHNQMVDKLSHIYNEYTELLAKDSKEFDVLPRERWWKLEAEHSSGP
SLLGDETHWPHMVVVELGTYLVDLMVKHMKVNSDILNSAYDRKLIPVLYHMYTFRSNKQV
GFIKLHPILTQMQQDAMDTTLTFDSYVMPMLCPPVPWTSAKFGAYLLTPTKMMRAVEGAN
QHEILLEKCQDADLHAVLDSLNQLGNAAWRINQPLLDIIISIFNDKGSEKLDVPPPNSEA
PKIPRYNQQDSATFTSAEKAHLKREVVNAKKKCSEMHSLRMDALYKLSIANHMRDEVFWF
PHNMDFRGRTYPCPPYFNHLGSDVTRAVLVFAEGKPLGPSGLEWLKIHLVNLTGLRKRSS
LAGRLEYANSIMDDILDSADNPLNGKKWWQNADEPWQTLACCMEIANAVRSPDPTHFISH
FPVHQDGSCNGLQHYAALGRDVIGATSVNLIPCEVPQDVYSGVAQQVEEFRARDAEKGLK
IAQVLEGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLKEIDDFPKEYVWDASHYLVHQV
FSSLKEMFTGTREIQDWLTESARLIAKSGSTVEWVTPLGLPIIQPYHRSRTQMLKATIQY
LSLQITHDSKERPDTVKQKNAFPPNFIHSLDSTHMMLTALYCYSAGLTFVSVHDCFWTHA
ITVDTMNKVCREQFVALHSQPILQELSNFLLKKYCSGLLSEVRSKKFLEYQRMLLLLAKV
PQTGNFDLQRVKESTYFFS
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttttgagactctgtacctttccaaagtgtctgagtggtcgcatactgttggaa
ataagtgttcgtcgtgtgccatatgcggaccattgccttacaatccggaataacattgaa
cggcacatttcagagccaccatggacatcacaacgaagacatttctcagctctgatccca
aagaaagaagatggggaaaaacgagtatgggaacaatctcagctgctggatgtgctagaa
gccaggatccagcaactccaatctgacgtcattgtagatgtccaacatgaaaaggtgcaa
tttgtcaaagcttccaagtcagggataggggcttcttcagggaacagtcccaagaatgtg
tctggggagaggaatgaggtgcccaaggcgggacagattattagtaagggagggggacag
actggtaaaggagagggcaaagatgcctcagcctccaaatcccgctggatggagaaactg
agccaggagaagaagactaaaacaaagaaactgaagcagaagctaggcctagaggataaa
cctgtgaaaagcagcaaaggcaaactgatgctaccaggtacctcacataaaaccatatcg
acaaaagcaggaataaagactgcatcaactgttaaaaagagcaaaactctgaaaaaccaa
gagcacactgtggcagcttcaaagcacgagcacactatggcagctgcaccagttgctgct
gctaatgtgcctattagaaaagccaaagggaaggggaaagcctcgaaggagccggctcct
gagttgtcgaaggccaggaacagggcagaggagctggagaggaaggatgaggccaaggcc
cgggagctggcagaggtggaggagctggagaggaagctgaaccagtgggctgtgtcggcc
agccctgagctcgtgcaggataacagcgaggccagggtgtatggtgacatccagcgcagt
gtgcgctgctacctggaggcctgtgtgttctgtggggaaatcgacagagctcaccgcttt
ctgctcagccaccaccgtatggccagccgacgcaacctgctcaacataggactctacaac
atcatgatgagggtctgggccaagaagggctctttaaaccagattggccgtatgttcatt
ctggtagaagaggctggtctgaagcctaaccttggctcttactgtgctgctctggagtgt
atgggtcgaaaccctgactgttccccacatgtcatcaacagggtcctgcgtcagatggag
gaggatggcctgcctgtggacgagctgttcagtcactgtgtgttcaggcaggatgagagg
gacatggtgctcagagccatccacaccgtgcaaccagacttccagcccagcatcaacact
atcctgcaaacctgctcctcaccactagtcaaagacttctacaccgagagagcggatgct
aaataccccaagatggccttcagcctggaggagctgcgggagaggttcagccgtcagctg
agcatcgagcaggccagcaccatcaccattcactctgtggaggccatgaagcctgtcacc
tcacacatggccaagatgcgggaccttctggcagtgcagcggttagtgtggcacaaagcc
ctggttggggccctgagggacagcaagatgatcctggccagcagcacccagaaagccacc
agacttagcctctacccctacctctgtctgctggatgaaaaggactatgtagacatcatg
atccagagtctgtccaacctgcctcccagtggggagtctctccacatcctggccaaggag
ctaggcaaccgggtccacaacaagttctgcatccgcatgaaggaacacaatcagatggtg
gacaagcttagccatatctacaatgaatatactgaactactggccaaagactccaaggag
tttgacgtattgcctagggagcgatggtggaagctggaggcagagcatagctctggtccc
tccctgctgggggatgagacccactggcctcacatggtggtggtggagctgggtacctac
ctggtggacctcatggtcaagcacatgaaagtgaacagcgacatcctcaactctgcctac
gaccgaaagctcatccctgtgctctaccacatgtacaccttccgcagtaacaaacaggtc
ggcttcatcaagctgcaccccatcctgacgcagatgcagcaggacgccatggacaccacg
ctgacctttgactcctacgtgatgcccatgctgtgcccgcccgtgccctggacctcggct
aaattcggcgcttacctcctcacccccaccaagatgatgcgcgcggtggaaggcgccaac
cagcatgagatcctgctggagaagtgccaggatgctgacctccatgccgtgctggactcc
ctcaaccagctgggcaacgcggcctggaggatcaaccagccgctgctggacatcatcatc
tccatcttcaatgacaagggtagcgagaagctggacgtcccgccgcccaactccgaggct
cctaagattccccgctacaaccagcaggactcagccaccttcacttcagcggagaaggcc
cacctgaagagggaggtggttaatgccaagaagaagtgcagtgagatgcacagcctcagg
atggacgcactctataaactctccatcgccaaccacatgagggacgaggtcttctggttc
ccccacaacatggacttccgcgggcgcacctacccgtgcccgccctacttcaaccaccta
ggcagcgatgtgaccagggccgtcctggtgtttgcagaggggaagcccttagggccgagc
gggctggaatggctgaagatccacctggtcaacctgacaggcctgaggaaacgcagctcg
ctggctggcaggctggagtacgccaactccatcatggacgacatcctggactctgcagac
aaccccctcaacggtaagaagtggtggcagaatgcagatgaaccctggcaaaccctggcc
tgctgtatggagatagccaatgccgtcaggtcacctgaccccacacacttcatctcccac
tttcctgtacatcaggatggctcgtgtaacggcctgcagcactatgcagccctgggtcga
gacgtgattggtgccacctctgtgaaccttattccctgcgaggtgccccaggatgtctac
agcggggtggcacagcaggtggaggagttccgtgcgcgggatgcggagaagggtctgaag
atcgcccaggtactggagggcttcatcagcaggaaggtggtgaagcagacagtgatgacg
gtggtgtacggggtgacgcgctatggaggacgcctccagatagagaagaggctcaaggag
attgatgacttccccaaggagtatgtatgggatgcctctcactacctggtccaccaggtg
ttcagcagtctgaaggagatgttcaccggcactagagagatccaggactggctgacggag
agcgccaggctcatcgctaagtcgggcagcacggtagagtgggtgacacccctgggcctt
cccatcattcagccctaccaccgcagccggacacagatgctgaaggctaccatccagtac
ctgagtctccagatcacccacgactctaaagagagaccagacactgtgaaacagaagaat
gccttccctcctaacttcatccactctctggactccacacacatgatgctgactgctctc
tactgctacagcgccggcctaacgtttgtctctgtccacgactgcttctggacccacgcc
atcacagtcgacaccatgaacaaggtttgccgggagcagtttgtggcgctgcacagtcag
cccatccttcaagagctgtccaacttcctactgaagaaatactgctctgggctactgagc
gaggtcagaagcaaaaagtttctcgagtaccagagaatgctgctgctgctggcaaaagtg
ccccaaacaggcaactttgatctccagcgggtgaaggaatccacttacttcttcagctga
DBGET
integrated database retrieval system
