Salmo salar (Atlantic salmon): 106613778
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Entry
106613778 CDS
T04363
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106613778
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
106613778
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_LRWD1
Cupin_1
LRR_6
LRRNT
LRR_9
V-set
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
106613778
NCBI-ProteinID:
XP_014071860
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Position
ssa10:complement(20255255..20288679)
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AA seq
606 aa
AA seq
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MAAGPGTGWPGLLLLLMTTVASNQSQGCPQRCECMAKLKSVACQGKRLSALPDSISSDTR
LLDMSGNMLRWVEHGDLLSYPRLEELDLSENIISVLEPNAFSSLQNLRVLSLRGNQLKLV
PMGAFSRLTNLTTLDLSGNKIVILLDFTFQDLKSLRNLEVGDNDLVYISNKAFLGLVGLR
QLTIERCNLTSISSQSLSYLRSLVTLRLRYLSISSLDDQNFCKLGGLRGLEIDHWPFLEH
ISPHSLQGLNLSWLSITNTNITSVPTAALRSLAHLTSLNLSYNPISVLESWALRDLVRLK
ELHLVNTNLMTVQPYALGGLRQIRLLNLSTNALVTLEEGAFQSVNTLETLRVDGNPLSCD
CRLLWILQRRKTLNFEGKSPVCAGPMEVQGRALSAFSDSALFDHFTCQKPKIRNRKLQPV
TAREGQVVSFVCRADGEPTPIIFWVSPQRRRITTKSTGRVIVLPEGTLEIRYAQVTDSGT
YICIASNAGGNATYFATLTVSALPLDAALMANRTYYTGDLNETNLNDTKVFLKFTLDLKT
ILISTAMGCCLFLGVVVFCFLMLFAWSRGRGQHKNNFSVEYSFRKVDGPAASGGQGGARK
FNMKMI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggtccaggcacggggtggcctggcctgctcctgctgctgatgactactgtg
gcctccaatcagagccaaggctgtccccagcgctgtgagtgcatggccaagctcaagtct
gtggcctgccaaggcaagcgcctgtctgccctccccgacagcatttcctcggacacacgc
ctgctggacatgagtgggaacatgcttcgctgggtggagcatggcgacctcctctcctat
cctcggctggaggagctagacctgagtgagaacatcatcagtgtcctggagcccaatgcc
ttctccagcttgcagaacctgagggtgctgtcgctgagggggaaccagctcaaactggtc
cccatgggcgccttctcacgcctcaccaaccttaccacactagacctgagtgggaacaag
atcgtcatccttttggacttcaccttccaggacctaaagagcctgaggaacctggaggtt
ggcgacaatgacctggtctacatctccaacaaggccttcctgggcctggtgggtctgagg
cagctcaccattgagaggtgcaacctgacctccatctccagccagtctctgtcctacctc
cgcagcctggtcactctgcgcctgcgctacctcagcatctcctccctggatgaccagaac
ttctgtaagctgggcgggctgcggggtctggagatcgaccattggcccttcctggaacat
atctccccccacagcctccagggcctcaacctgtcttggctgtccatcaccaacactaac
atcacctctgtgcccacagccgccctacgcagcctggcccacctcaccagcctcaatctc
tcctacaatcccatctcagtgctggagtcctgggcccttagggacctggttcggctgaag
gagctacacctggtcaacaccaacctgatgacggtgcagccgtacgctcttggcggcctt
cggcagatccgcctgcttaacctgtccactaatgccctggtaaccctggaggagggcgcc
ttccagtccgtcaacaccctggagacgctgcgtgtagatgggaaccctctgtcctgtgac
tgccgcctgctttggatcctccagcgcaggaagaccctcaactttgaagggaagtcccca
gtgtgtgcgggacccatggaggtgcagggcagggccctcagcgccttctcagactctgcc
ctctttgaccactttacctgccagaagcccaagatacgcaacaggaagttgcagcctgtc
actgccagggagggccaggtagtgtcctttgtgtgccgggcggacggagagcccacacct
atcatcttctgggtatctccacagcgccgtcggatcactaccaagagcactggacgtgtc
atcgtcctacctgagggaacgctggagatccgctacgcccaggtgaccgacagcggcacc
tacatctgcatcgccagcaatgccgggggtaacgccacctactttgccacgctgaccgtg
agcgcgctgcctctggacgcagcgctcatggccaaccgcacatactacacaggtgacctc
aacgagaccaatctgaacgacaccaaggtcttcctcaagttcaccttggacctcaagaca
atcctgatatccacagccatggggtgttgcttgttccttggcgtggtggttttctgtttc
ctgatgctgttcgcatggagccggggccgggggcagcacaagaataacttctcagtagag
tactccttcagaaaggtagatggccctgctgccagtggcggacagggaggggcccgtaag
ttcaacatgaagatgatttga
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