Salmo salar (Atlantic salmon): 106613824
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Entry
106613824 CDS
T04363
Symbol
colgalt2
Name
(RefSeq) collagen beta(1-O)galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00310
Lysine degradation
sasa00514
Other types of O-glycan biosynthesis
sasa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
106613824 (colgalt2)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
106613824 (colgalt2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sasa01003
]
106613824 (colgalt2)
Enzymes [BR:
sasa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
106613824 (colgalt2)
Glycosyltransferases [BR:
sasa01003
]
O-Glycan biosynthesis
O-linked Gal type
106613824 (colgalt2)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
106613824
NCBI-ProteinID:
XP_014071946
UniProt:
A0A1S3T5T2
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Position
ssa10:complement(21953623..21990565)
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AA seq
618 aa
AA seq
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MMPAVRAVGIGLLCAMLVALMPGGMSDLVTLVQDPVRPESSLLMPKVMIAILARNAAHSL
PHYLGCIDRLDYPKERIAIWAATDHSVDNSTAMLREWLKQAQDQYHYVEWRPMEEPKSYT
DEWGPKHWPPSRFNHVMKLRQAALKAARERWADYILFADGDNLLTNPKILNLLMAENLTL
VAPMLESRSLYSNFWCGITPQGYYKRTPDYQPIREWKRLGCFAVPMVHSTFLLDLRRGAS
RELAFYPPHPDYSWAFDDIMVFSFSARQADVQMYVCNREHYGFLPVPLKASQNVDDEKES
FTHTIAEAMIDHNIAPSEYLYNPEMPQDKMGFDEIFLINLKRRLDRRQRMLSTMASLGLQ
ATLTDAVDGKALNSSQLQALGIEMIPGYKDPYSGRVLTRGEIGCFLSHHSTWVQMVERGL
SKVLVLEDDVRFEPRFKRRMMTIIEEVEKAQLDWDLIYVGRKRMQVHQPEHSVEGVNNLV
EADYSYWTLGYALSAQGARKLLAAQAFSKMLPVDEFLPVMFNKHPNSDFMSHFEPRDLKA
FSVEPLLLYPTHYTGEPGYVSDTETSTIWDDEATATDWDRLHQHDRKTEQQGRIHTVAQN
SVTGDSPPPAARSTRDEL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgatgccggcggttagagccgtgggaatcggactgctctgcgcgatgcttgtcgccctc
atgccgggtggcatgtcggacttggtgactctggtgcaggacccggtccgacccgaatcg
tcactgctgatgccaaaagtcatgatcgccattctggctcgcaacgcagcgcacagcctg
ccgcactacctgggctgcatcgacaggctagactacccgaaggagcggatagctatctgg
gcagcgacagaccacagtgtggacaacagcacagccatgctgagggagtggctgaagcag
gctcaggaccagtaccactatgtggagtggagacctatggaggagcccaagtcatatact
gatgagtgggggcccaagcactggcctccgtcccgcttcaaccatgtgatgaaactgagg
caggctgctcttaaggcagcacgggaacgctgggcagattacatactgtttgcagacggt
gataacctgctgaccaacccaaagattctcaacctgctcatggctgagaacctgactctg
gtagctcccatgctagagtcacgctctctctactctaacttctggtgtggcatcacccca
cagggttactacaaacgtacccctgactaccagccaatcagggagtggaagcgtctgggt
tgcttcgctgtacccatggtgcattctaccttcctgctggacctgaggcgtggcgccagc
agggagctggccttctacccccctcaccctgactacagctgggccttcgatgacatcatg
gtgttctccttctctgcccggcaggcagatgtgcagatgtacgtgtgtaacagagagcac
tatggcttcctgccggttcctctgaaggcctcgcagaatgttgacgacgagaaggagagt
ttcacacacaccatcgctgaggccatgattgatcacaacatagcaccctcagagtacctg
tacaatcccgagatgccgcaggacaagatgggctttgatgagatattcctgatcaatctg
aaacgtcgtctggacaggagacagcggatgttgagcaccatggcctctctgggtctgcag
gccaccctcactgacgcagtggacggcaaggctctgaactcttctcagctgcaggcgttg
ggtatagagatgattccaggttataaggacccgtactctggccgtgttttaaccagagga
gagataggctgcttcctcagccaccactccacctgggtacagatggtggagcgtggtctt
tccaaggtgctggtgctggaggatgatgtgcgctttgagcccaggtttaagagacgaatg
atgaccatcatagaggaagtagagaaggcccagctggactgggatctcatctatgttggg
cgtaagcgtatgcaggtgcaccagccggagcattcggtggaaggggttaataacctggtg
gaggctgactactcttattggacgctgggctatgccctgtcagcgcagggtgccaggaag
ctgctggctgctcaggccttcagcaagatgttacctgtcgatgagttcctccctgtcatg
ttcaacaaacaccccaattctgacttcatgtctcactttgagcctcgggacctgaaggcc
ttctctgtggagcccctcctcctgtaccccacccactacacaggcgagccgggctacgtg
agtgacacagagacctccaccatctgggacgacgaggccaccgccaccgactgggaccgc
ctgcaccagcacgacaggaagacagagcagcaaggccgcatccacaccgtggctcagaac
agtgtgacgggagactcacctccgcccgccgcccgctccacacgagatgaactctga
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