Sphaerochaeta associata: MUG09_00375
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Entry
MUG09_00375 CDS
T08141
Name
(GenBank) helix-turn-helix domain-containing protein
Organism
sass
Sphaerochaeta associata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
GGDEF_2
HTH_AraC
DUF4446
Motif
Other DBs
NCBI-ProteinID:
UOM51228
LinkDB
All DBs
Position
91197..93410
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AA seq
737 aa
AA seq
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MKLQFRHKRWFYKHLFSYILLLVVPLVIINGCFGKQINETYQQEVVSRLRSDIHALRDTV
DDELELLLSTVHQFQLLQTVNRYRFEDDPLQANSIKSMLATFTITNRLLGDIVYLPYGQN
FLFTSSTTSRIDFFAREMYVTEGLEPEEFLSELYSLKHLKAYSVERYKNEKGLVIAIPLV
SDYATVSGVCLFFIADSTLEAMIHSKLSQYRARLQLHADDDSLLFQSSASDEPMPDQAIT
FSVSSNVAPWAYTVHIPQEQALLDDLNRLSGLQQTSTLIVVLAVSVLIFFLMFINYTPIK
RLQKLAGNLADANPAARKLGELEEIASTLDYLKNQNTSLVMKLEKSRESEHNIVLQRLLS
GRYKTIKAFNVDASELSIEFQYPQFLVACIQLQETNRDSDELAQLMRDELPEELNCYYVF
TPIPDRIYFINSVRTEDFVCIPAFYEGMRKTIEAQTGLSLTVGLGSLVEGAIDIPRSFLE
ARTALDYRFVKGKNTTIIFDEVCKSVSYSVSYPHTLLDQLHVSLKARNEEAIESRTAELI
AFLVQDTIPLFLAKSISFDMITLFFDHLPASVQSAEDSQREFFLLSDIDTIDEVVQIVES
VKDKLLHMEKLEHTEDSQALLKDITEYIKVHCFECNFTMLQVSDAFSMQLPNLSLFFKEH
TQLNLLDYVTALRMHAAKQLLSETDLPLKDVSLQIGYYNISSFIRRFKQLNGITPGDYRK
IHKGMQRKPKSPDENLV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctccagttcaggcataaacgttggttttataaacacctgttctcctacatcctc
ctgcttgtggttcccttggtcatcatcaatggatgttttgggaaacaaatcaacgaaacg
taccagcaggaggtggtctcccgactcaggtcggacatccatgcgctcagggatacggta
gacgacgaactcgagctcctgctcagtaccgtacaccaatttcaattgttgcagacagta
aatcgttatcggtttgaagatgatcccctgcaggccaactccatcaaatccatgctggcc
acctttaccataaccaatcgcttgcttggcgacatagtctatctgccttacggccagaac
tttctttttaccagctcaaccaccagcaggattgactttttcgcccgggagatgtacgtg
accgagggcctcgaacctgaggaatttttatcagagctttactccttgaagcacttgaaa
gcgtattcagtggagcgctacaagaatgagaaggggctggtgattgccattcccctggtt
tccgactacgcaacagtaagcggggtctgcctgttcttcatcgccgattccaccctggaa
gcgatgatacacagcaagctttcccaatacagagcccgtctgcagttgcatgccgatgat
gattccctcttattccaatcctccgcttctgatgagccaatgcctgatcaagcgattacc
ttctctgtgtcatcgaacgtggctccttgggcctatacggtccacattccccaagaacaa
gcactcttggatgatttgaatcgactctccggcttgcagcagaccagcaccttgatcgtg
gtgcttgctgtttcagttctcatattctttctcatgttcatcaactatacgccgatcaag
cgactgcagaaacttgcgggaaatcttgccgatgccaaccctgccgcccgaaagcttggt
gagctggaggagattgcaagcaccttggattatctgaagaaccagaatacctcgcttgtg
atgaaactggaaaaaagccgggaatcagaacacaacatcgtgttgcaaaggttgttgagc
ggcaggtacaagaccattaaggcctttaatgtggatgcatccgagctgagtattgagttt
cagtacccgcagttcctggttgcttgcatccaactgcaggaaaccaaccgggatagtgat
gaattggcccaattgatgcgtgatgagctgcccgaggaattaaactgctactatgtgttc
accccgattccagaccggatctatttcatcaatagtgtaaggaccgaggatttcgtatgc
atacccgccttctatgagggcatgcgaaagaccatagaggcacaaaccggattgagtctg
accgtcggccttggttctctggtcgaaggagcgatcgatattccccgttccttcctggaa
gcacgtacggcattggattatcggtttgtcaaagggaagaatacaaccataatttttgac
gaggtgtgcaagtctgtaagctattcggtatcctatccccacaccctgttggaccaattg
catgtttcgctgaaagcgcgtaatgaagaagcaattgagagcaggacggctgaactcatt
gcgtttctcgtgcaggatacgattcctctctttttagcgaagagcatctcctttgatatg
atcacccttttcttcgatcatctgccggcttccgtacaatcggctgaggattctcagcgg
gaattcttcctgctcagcgatattgacaccatcgatgaagtggtgcaaatcgtagagtcg
gtgaaggataagcttttacatatggaaaagcttgaacataccgaggattcccaggcgttg
ctcaaggatatcaccgagtacatcaaggtgcattgctttgaatgcaacttcaccatgctg
caggtatcggatgctttttccatgcaattgcccaacctgagcctgtttttcaaggaacat
acccagctcaatctgctggattacgtaaccgcactccgcatgcatgcagccaagcagttg
ttgtcggaaacagaccttccgctcaaggatgtcagtttgcaaatcggatactataatatc
tcaagctttattcgtagattcaagcagctgaatgggataacccccggggactatcgcaag
atacataaggggatgcaaagaaaaccaaagagtccggatgagaatcttgtatag
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