Sphaerochaeta associata: MUG09_06625
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Entry
MUG09_06625 CDS
T08141
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sass
Sphaerochaeta associata
Pathway
sass03420
Nucleotide excision repair
sass03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sass00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MUG09_06625
03430 Mismatch repair
MUG09_06625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sass03400
]
MUG09_06625
Enzymes [BR:
sass01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MUG09_06625
DNA repair and recombination proteins [BR:
sass03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MUG09_06625
MMR (mismatch excision repair)
Other MMR factors
MUG09_06625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
DEAD
YgfZ_barrel
RAC_head
Motif
Other DBs
NCBI-ProteinID:
UOM52437
LinkDB
All DBs
Position
complement(1431297..1433315)
Genome browser
AA seq
672 aa
AA seq
DB search
MYFDLAKELNTQQCTAAATLHGPLLVIAGAGSGKTRMLTYRIANMLQNGIAEESILALTF
TNKAAKEMGERIRSLTNLPLKKLTTTTFHSFGMGVLKQYIQHLGFKNNFTIYDTNDRMAL
IKEVIQNLDYVVETFDLYELSTLFSDIKTKRKVFGANASDKIRNLYNEYEKHLKAYNAVD
FDDLIMKPLDLFEKKPEVLQALRKRYTHILVDEFQDTSLSQYRMVELLAQESRNLCVVGD
DDQSIYSWRGANYENLVMFERDFPERLEVKLERNYRSTGTILEAANSLIVNNQIRKEKKL
WTDSGKGSSIRLIHPANDDDEAAVIADEILMTHKKEDRPFSDFGVLVRTNSLIDTLETKF
TERGIPSQVTGGQSFFDRKEIRDIISYLKVIANQDDDINLLRVINTPRRGIGRTTLEKMR
KVADEHKCSLFSALTLMSVATDGQIKEGMQKTLKRFADMIENYHHQLFETRTQRNMVLRT
LIGEIGYKAYLEAEHPDNENVVAFKMKGISMLCDMLGRWERNPENSKASIFDYLNRISLA
GKENVDEERAGKIALMTIHASKGLEFDTVYLAGVEDQYIPHARAIEDNPANIDEERRLFY
VAITRARRSLIISSCEKRKRGHDEVASLPSRFLEEIPKALFDEEDPAKQLSSEQVVDKLR
LLRERLAARNNV
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcgatttagccaaggaactcaatacccagcagtgcacagctgctgcaaccctt
cacggcccgctgcttgtcattgcaggagccgggagcggaaaaacccgtatgctcacctat
cgcatcgccaatatgctgcaaaacggcattgccgaagagtcgattctcgccctgacgttc
accaacaaggcggccaaggagatgggagagcgcatacgaagcctcacaaatcttccactg
aagaaattgacaaccaccacctttcactcctttgggatgggggtattgaaacagtacatc
cagcatctcgggttcaagaacaacttcaccatctacgatacgaacgaccgcatggccttg
atcaaggaggtgatccagaatctcgactatgtggttgaaaccttcgacctctatgaactt
tccacgctcttcagcgatatcaagaccaagcgtaaagtattcggagctaatgcatcggac
aagatccgcaatctctacaatgaatacgagaagcatctgaaagcatataatgccgtggac
ttcgatgacctgatcatgaaaccgcttgacctgtttgaaaagaaacccgaggttctccag
gcgttgcgaaagcgttatacccatatccttgtagatgagtttcaggacacctccctctcc
caatatcgtatggtggagctcttggcccaagagagccgcaacctgtgtgtcgtcggcgac
gacgatcagagcatctacagctggcggggtgcgaactacgaaaacctggtgatgttcgag
cgtgatttccccgaacgtctggaagtcaagctcgaacggaactaccgttccaccggcacc
attttggaagcggcgaactcgttgatcgtcaacaaccagatacgcaaggaaaagaagctt
tggacagacagcggcaagggatcctcgattcgcctgattcatcctgcgaacgatgatgat
gaggcagccgttattgccgatgaaatactgatgacgcacaaaaaggaggaccgtcccttc
tccgatttcggtgtattggtgagaaccaacagcctcatcgataccttggagaccaagttc
accgagcgggggattccttcgcaggtgaccggcggccagagctttttcgaccggaaggag
attcgtgacatcatcagctatctgaaggtcatcgccaatcaggacgatgatatcaatctg
cttagagtcatcaacactccaaggcgcggcatcgggcgtactacccttgagaaaatgcgc
aaggtagcagacgagcacaagtgctcgcttttcagcgccctgaccttgatgtcggttgcc
accgatggacagatcaaggaaggaatgcaaaagaccctcaagcgcttcgccgatatgata
gaaaactaccatcaccaactcttcgaaacacggacgcaacgaaatatggtgctgcgcacc
ttgatcggtgagatcgggtacaaggcgtatctggaggccgaacatcctgataatgagaac
gtggtcgcctttaagatgaagggcatctccatgctttgtgatatgcttgggcgctgggaa
cgtaatccggagaattccaaggcatcgattttcgactatttgaatcgtatcagccttgca
ggcaaggagaacgtcgatgaggaacgtgcaggcaagatagccctcatgaccatccatgct
tcaaaagggctggagtttgatactgtctatcttgcaggagtggaagaccaatatattcct
catgcgagggcgatcgaggacaatcctgccaacatcgatgaggagcgaaggctcttctat
gtggcgatcacgcgtgcccgaaggtcgctgatcatcagcagctgtgaaaaacgcaagaga
gggcacgatgaggtggccagcctaccctcgcgtttcctggaagagattcccaaggcgctg
tttgacgaggaggacccggccaagcagctatccagcgagcaggtggtcgataaactcagg
ctcctgagggaacgacttgctgccagaaacaacgtttag
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