Sphaerochaeta associata: MUG09_06850
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Entry
MUG09_06850 CDS
T08141
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sass
Sphaerochaeta associata
Pathway
sass03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sass00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MUG09_06850
09124 Replication and repair
03420 Nucleotide excision repair
MUG09_06850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sass03021
]
MUG09_06850
03400 DNA repair and recombination proteins [BR:
sass03400
]
MUG09_06850
Enzymes [BR:
sass01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MUG09_06850
Transcription machinery [BR:
sass03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MUG09_06850
DNA repair and recombination proteins [BR:
sass03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MUG09_06850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UOM52482
LinkDB
All DBs
Position
complement(1477926..1479587)
Genome browser
AA seq
553 aa
AA seq
DB search
MQDTPLIVQSDKTLLLDVHHKDSEACRADLVRFCELIKSPEHMHTYALSPISLWNAASSG
FKVESVVDRLKAWSRFAVPESILFYVKDIASRWGKVRLSESDDPRYYQLHVESQRIKTEL
MQRKVLSKLLVVKDEHSFLLETYARGEVKLQLIKIGYPVDDQVPLKKGPDVQIALRTETV
GGKPFSVRPYQQMASDALLGDLGPGCGFGTIVLPCGSGKTVVGMQIMQRLCTRTLVVTTN
VAAVHQWMQEIQDKTTLAKEQIGEYTGERKEPKDVTVCTYQVLTYRPDKEGPFPHLELLT
KGEWGLIIYDEVHMLPAPVFKVTAELQAVYRVGLTATLVREDGREDEVFSLVGPKRFDVP
WNELQQQGFIAEAYCHEIRLDLPKELEIPYALGSKREKYRMASENPMKLEVVKDLVSRHP
DDFILIIGQYLDQLKMIADAFGLPIITGSTPNAKREELYKAFKEGDCRILVVSKVANFAI
DLPDASVAIQVSGTFGSRSEEAQRLGRILRPKNRSSFFYSVVTRYSNEEEFAANRQKFLA
EQGYSYEIEVWTN
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataccccgctgattgtacaaagtgacaagaccctgcttttggatgtccaccac
aaggacagtgaagcttgtcgtgccgatttggtacgattctgtgagttgatcaagagcccg
gagcacatgcatacctacgcactctccccaatttcgctctggaatgctgcatcttccggc
ttcaaggttgagtcggtcgtcgatcgtctcaaggcatggtcacggtttgcggtaccggaa
agcatcctgttctatgtaaaggacattgcatctcgatggggaaaagtgcgccttagcgaa
agcgacgacccccgttattatcagttgcatgttgagagccaaagaatcaaaacggagctg
atgcaacgcaaggtgctttccaagcttttggtggtcaaggatgagcactcctttctgctg
gaaacatacgcccgtggtgaagtcaagctgcaattgatcaaaataggctatccagtcgat
gaccaggttccgctcaaaaagggtccggatgtccaaatcgccctgaggactgaaacagtc
ggcggcaaacctttctccgtcagaccctaccagcagatggcctccgatgccctgctcggg
gatttgggacctggctgcggattcggcacgattgtgcttccctgcggttcgggaaagacc
gtggtagggatgcagatcatgcaacgcctgtgcacccgaacattggtggtaaccaccaat
gtggcggcggtgcaccagtggatgcaggaaatccaggacaagaccacccttgcgaaagag
cagatcggcgagtataccggcgagcgcaaggaacccaaggatgtgaccgtttgcacctac
caggtgcttacctaccgacccgacaaggaagggccgtttccccatcttgaactccttacc
aagggcgagtggggcctgatcatctatgatgaggtgcatatgcttcccgcacctgtattc
aaggttactgcggagctgcaggccgtctatcgtgtcggattgaccgccacgctggtccgg
gaggatggaagggaggacgaggtattcagtctcgttggtcccaaacgcttcgacgtaccc
tggaatgaactgcagcagcagggcttcatcgccgaagcatactgccacgaaatccgcctc
gatcttcccaaggagcttgagattccctatgcgctgggcagcaagcgggagaaataccgc
atggccagtgagaatcccatgaagcttgaagtggtaaaggacttggtaagccggcatccg
gatgatttcatcttgattatcggccaatatctggaccaactgaagatgatcgccgatgcg
ttcggccttcccatcattaccggcagcaccccgaacgcaaaacgcgaagagctgtacaag
gccttcaaggaaggagattgcaggatcctggtcgtcagcaaggtggccaacttcgccatc
gacctgcctgatgcttcggtggccatccaggtttccgggaccttcggaagccgcagcgag
gaggctcagcggctggggagaatcctcagaccgaaaaatcgttccagtttcttttactcg
gtggtgacccgttactccaatgaggaggagttcgctgcaaacaggcagaaatttcttgcc
gagcaaggctattcctatgagatagaggtatggaccaattga
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