Sphaerochaeta associata: MUG09_09230
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Entry
MUG09_09230 CDS
T08141
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sass
Sphaerochaeta associata
Pathway
sass03410
Base excision repair
sass03430
Mismatch repair
sass03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sass00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MUG09_09230 (recJ)
03430 Mismatch repair
MUG09_09230 (recJ)
03440 Homologous recombination
MUG09_09230 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sass03400
]
MUG09_09230 (recJ)
DNA repair and recombination proteins [BR:
sass03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MUG09_09230 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MUG09_09230 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MUG09_09230 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UOM49738
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All DBs
Position
complement(1994114..1996198)
Genome browser
AA seq
694 aa
AA seq
DB search
MHEQYGLDVLSASILVRRGQTSSEQVKFFLEQELTYLHNPFLFDDMEEVVDRINEAVAEG
ENVCVIGDRDVDGITSTALLVQELRDMGLSVTYQLPEGDDPYGMTIKGVEKAHEDKVTLM
ITVDCGISNFDEIAHAHSLGIDTIVLDHHISGDTLPPALAIIDPKMPGSGYPFEHLAGCG
VAAKVIWALRFSKTDFYREECILLHAQPGHDTIIIQAMRIQNLLVIDRVIEEVNPGLLSP
SQSKALSFLSCGLPILVLDAQAELVQLKQAFGKKIDIHLVEMRPQMEAVMPVMKNKGLFA
LSNLSRAIKYSPFGRDELQVLYTLFVAYCMKKHPSLDSDYESILDLVAIGTVADLMPMED
ENRILVKRGLKVLAQGRRESLMPLFSMQNLLGKQLSTSDISWQISPVINASGRMGKPSVA
LEMMLSSDLGQTEELAGQLLRLNKERQKLGEESWDRLLKMAKDSFEATGSKLVVVEDSTL
SRGITGVMASRLLKQFNAPALVLATVAEGRVSASMRSPDSFNARDFLSRFSDLFLDFGGH
ACAGGFSMDISQLHSFKQRVMDEIDTMDCLPDEVEEVNIDCTLPEAYMTPDIIKVVEFFE
PYGEKNPPLVLLMEGAVIENIQIMNNKNGSVQHVKMTLAFGQYKWPALYWNAADRIGRDF
DVGTAVDIVFRLGRNYFRNQETLQITVLDLKPSV
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
ttgcatgaacagtacggtctggatgtgctcagtgcctccattctggtcagaagaggacag
acctccagcgagcaggtaaagttttttttggagcaggagctcacgtatctgcacaatccc
ttccttttcgatgatatggaagaggtggtcgaccgcatcaatgaagcggttgccgaggga
gagaacgtatgtgtcatcggcgaccgcgatgtggatgggatcaccagcaccgccttgttg
gtgcaggaactcagggacatgggcctgtcggtgacgtaccagcttcccgagggcgatgat
ccctacggcatgaccatcaagggagtcgagaaggcgcatgaggacaaggtgacgcttatg
atcaccgtcgactgcggcatatccaactttgacgaaatcgctcatgcccacagcctcggc
atcgataccatcgtgctcgaccatcacatcagcggcgatacgctgcctccggccttggcc
atcatagatccgaaaatgccgggttcagggtatcctttcgagcatttggccggatgtggt
gttgcagcaaaagtcatatgggcgttgcgcttcagcaagacggatttctaccgtgaggag
tgcattcttctgcacgcccaacccgggcacgacaccataatcattcaggcgatgcgaatc
cagaatcttctggtcatcgaccgggtgatcgaggaagtcaatcccggcttgctctccccg
tcgcagagcaaggctctctcctttctctcctgcggacttcccattctggttctcgatgct
caggcggagttggtgcagctcaagcaggctttcgggaaaaagatcgatatccacctggtg
gagatgaggccccagatggaggctgttatgccggtcatgaagaacaagggtttgttcgcc
ctttccaacctgagccgtgccatcaagtattcaccgttcggcagggatgaactgcaggtg
ctctacaccctgtttgtagcctactgcatgaagaagcatcccagtctggacagcgattat
gaatcgattctcgacttggtcgccatcggtaccgtcgccgacctgatgccgatggaggat
gagaaccgcatcctcgtcaaacggggtctgaaggtgctcgcccaaggaagaagagaatcc
ttgatgccgttgttttccatgcagaacctgttgggaaagcagctatccaccagtgatatc
tcctggcagatcagcccggtgatcaatgcatcggggagaatgggcaagccttcggttgcc
ttggagatgatgctcagcagcgatcttggacaaaccgaggagctggccggtcaacttctt
cggctcaacaaggagcggcagaagcttggcgaggagtcctgggatcgcttgttgaaaatg
gcgaaggacagtttcgaggccaccggttccaagctggtggtggttgaggattccacgctc
tcgcggggaataaccggggtgatggcaagccgattgctcaagcagttcaacgctcccgcc
cttgtgttggcgacggtagcggaaggaagggtcagcgcatccatgcgaagtccagactca
ttcaacgcgcgcgatttccttagccggttcagtgatttgtttcttgatttcggcggacat
gcctgtgcaggcggcttttccatggatatttcgcagcttcatagtttcaaacagcgggtc
atggatgagatcgacaccatggactgcctgcctgatgaggtggaggaagtcaacatcgac
tgtaccctgcctgaggcgtatatgacccctgacatcatcaaggttgtcgaattttttgaa
ccgtacggggagaagaaccctcctttggtgttgttgatggaaggagcggtgatcgagaac
atccagattatgaacaataagaacggctcggtgcagcatgtgaagatgactcttgccttc
ggccagtacaagtggcctgccctgtattggaatgccgccgaccgtatcggcagggatttc
gatgtaggaacggcggtggatatcgtcttcagacttggaaggaattacttcaggaaccag
gaaacgctgcaaattactgttctggacttaaagccttctgtataa
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