Sphaerochaeta associata: MUG09_12580
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Entry
MUG09_12580 CDS
T08141
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sass
Sphaerochaeta associata
Pathway
sass03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sass00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MUG09_12580 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sass03400
]
MUG09_12580 (priA)
Enzymes [BR:
sass01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MUG09_12580 (priA)
DNA repair and recombination proteins [BR:
sass03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MUG09_12580 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
Helicase_C
Zn_ribbon_PriA
ResIII
AAA_30
ATPase_2
AAA_16
AAA_19
Zn_ribbon_6
SLFN-g3_helicase
Trm112p
Motif
Other DBs
NCBI-ProteinID:
UOM50390
LinkDB
All DBs
Position
complement(2712068..2714032)
Genome browser
AA seq
654 aa
AA seq
DB search
MALFAQVALDLPLKQSFTYTIDPEMAKKVEVGHRVVVPFGKREMTGYVIELLDAFSATYE
LKPIKRVIDASPLYGRQTIDLAAWMSRYYLCSLGEALSMMIPGGRRELGLPALEVEEDLS
FARIEQLSDEQDAAVQTILRSEKPMYYLYGVTGSGKSEVFLRCAEAVIAQGKAVIYLVPE
ITLTHQLAQQVSSRFVNKVAILHSALTPSQRLKEWKRIIAGEVSLAIGARSAVFAPFENL
GLIILDEEHENSYKSGNTPRYHARQVAQRRCQQEGATLVMGSATPSLEAYSLMQDGTQVG
ALHLTKRVAGGSMPAVEVVNLALEKSLVSAALKQGIKATLDKKKQVILFLNRRGFSYFFH
CNSCGYELHCPHCSVALTYHKKSEQMVCHYCGYRTSPMRVCPECRSVDVTYSGFGTEMVE
QEIRTLFPKARVERLDTDSAKEKGHVQKTLSEFRQGSIDILLGTQMVAKGLNFPKVELVG
IVLADSGMNIPDFRSQERTFSLLVQVSGRAGRYNDQGKVIIQTFHPDNPAIQYALAGDVE
GFYHEELVVRRDTAFPPYSRLINLVLRGRNQKKVEAETHKLEELLNAASAYIPAEVLTSG
ECPLEMIASNYRFHILVSAKDGSSAHHLVATALASYTPPSAVYLEVDIDPLQLL
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggccttgtttgcccaagtggcactggatttgcctctcaaacagtcgtttacgtatacc
attgacccagagatggcaaagaaggtcgaagtaggccatcgagtggtcgtcccttttgga
aagcgagagatgaccggctatgtcattgagcttctggatgccttcagtgctacgtacgag
ctcaagccgatcaagcgcgtcatcgatgcatcgcctctgtacggcaggcagaccatcgat
ctggctgcatggatgagccggtactacctctgctcgctcggcgaggcgttgagcatgatg
atccccggaggacgaagggagttgggtctcccggcccttgaagtggaggaggacctcagc
tttgcacgtatcgagcagctcagtgatgagcaggatgcggccgtccagacgattctacga
agcgaaaagccgatgtactatctctacggagtgaccggcagcggcaagagcgaagtcttc
ctgcgctgtgccgaagctgtgatagcacaagggaaagcggttatatatctggttcccgaa
ataacgttgactcatcagttggcccaacaagtttcctcccggtttgtcaacaaggtggcg
atacttcactccgcccttactcccagtcaacggctgaaggagtggaagcgcatcatagcc
ggtgaagtgagccttgccatcggggcccgcagtgctgtcttcgccccgtttgaaaatctt
ggtctgatcatcctcgacgaggagcatgagaacagctacaagagcgggaacaccccccgc
taccatgccaggcaggtcgcccagcggcgttgtcagcaggaaggggcgacgttggtcatg
ggaagcgcaaccccatccctcgaggcctacagcctcatgcaggacggcactcaggtaggt
gccctgcacctgaccaagcgggtggccggtggaagcatgcccgccgtcgaggtggtgaac
ctcgcccttgagaaatccttggtcagcgctgcgttgaagcagggcatcaaggcgacactg
gacaagaaaaagcaggtgatcctgttcctcaatcgcagggggttttcctactttttccac
tgcaacagctgcggctatgaacttcactgcccccactgctcggtggccctgacctatcac
aagaagagcgagcagatggtatgccactattgcggctaccgtacttcaccgatgcgggtc
tgtcccgagtgccgcagcgtcgatgtaacctacagcggcttcggtaccgagatggttgaa
caggagattcgtacgctcttccccaaggcccgggtagagcgcctggataccgacagcgcc
aaggaaaaaggccatgtgcagaagacactttccgagttccgccaaggctcgatcgatatc
ctgctcggaacccaaatggtagccaagggtctcaacttccccaaagtcgaacttgtcggc
atcgtactcgccgacagcggtatgaacattcccgacttccgaagtcaggaacggacgttc
agcctgctggtccaggtctccggaagggcgggacggtacaacgaccaaggaaaggttatc
atccaaaccttccatcctgacaatcctgcgatccaatacgctctcgccggcgatgttgaa
gggttttatcatgaggaactggtggtacgacgcgatactgcattcccaccgtacagcagg
ctcatcaacctggtgctcagaggccgaaaccagaagaaggtggaggcagagactcacaag
ttggaagagctgctcaatgctgcatcggcttatattccggccgaggtgcttacctcggga
gagtgcccgcttgagatgatcgcctccaactaccggttccatatcctggtctcagcgaag
gacggctcttcggcacaccatttggtggcgacagcccttgcttcctatacccccccctcg
gcggtgtacttggaagtggatatcgatccgctgcagctgctctag
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