Sphaerochaeta associata: MUG09_14540
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Entry
MUG09_14540 CDS
T08141
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sass
Sphaerochaeta associata
Brite
KEGG Orthology (KO) [BR:
sass00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sass03016
]
MUG09_14540
Enzymes [BR:
sass01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MUG09_14540
Transfer RNA biogenesis [BR:
sass03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MUG09_14540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
UOM50780
LinkDB
All DBs
Position
complement(3150239..3151123)
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AA seq
294 aa
AA seq
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MRMYTMIDSDAKLADLQSQWKEKGISIVAMDFEGEFNLHIYGEHLCLIQLFDGSAYALVD
PFTISKDALKAFLEDGSLLKVMFDCASDSALVRKQYGILLEGVYDIRLSALALGYTGNLT
GLVERYIPEAEKPNLSSKKKNQMTNWLVRPLKADQIEYALSDVEHLLVLKDILDAEVAEK
GLTEKVNLEMQQAGRSKGPDKPGWTKFSSWKYLSREEKVFLKHFFLARDELARKYNVPAV
RILEKHVLLQMAKDVPSSDADFHVYCNNCTARKLGELTAKLKSAKTNALAELSR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatgtacaccatgattgattccgatgcaaagctggcagacctgcagtcccagtgg
aaagaaaagggcatcagtattgttgccatggattttgaaggtgaattcaacctgcatatt
tacggggagcatctctgcctcatccagctttttgatggatcggcctatgcgttggtcgac
ccctttaccatctccaaggatgccttgaaggctttcttggaggacggctccttgttgaag
gtgatgttcgactgtgcgagcgattcggccttggtacgcaagcagtacggcatcctgctc
gaaggcgtctatgacattcgcctttccgctcttgcccttgggtataccggcaatcttacc
gggctggtggagcgctacattcctgaagcagaaaaacccaatctttccagcaagaagaag
aatcagatgactaactggcttgtgcgtccgctgaaggccgaccagatcgagtatgcactt
tcggatgttgaacacctcttggtgctcaaggacatcctcgatgccgaggttgcagagaaa
ggcctgacagagaaagtgaatctggaaatgcagcaggcaggcaggagcaagggacccgat
aaaccgggttggaccaagttctcgtcgtggaagtacctctcccgtgaggagaaggtgttc
ctcaagcacttcttccttgcccgcgatgaattggcccgcaagtataacgtacctgcagtc
aggatactggaaaagcatgtgctgttgcagatggccaaggatgtaccctcgtcggatgca
gacttccatgtgtactgcaacaattgcaccgccaggaaacttggcgagctgacagccaag
ctcaagagcgcaaaaaccaacgcactcgctgaactcagccgttga
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