Sphaerochaeta associata: MUG09_14975
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Entry
MUG09_14975 CDS
T08141
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sass
Sphaerochaeta associata
Pathway
sass03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sass00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUG09_14975 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sass03021
]
MUG09_14975 (rho)
03019 Messenger RNA biogenesis [BR:
sass03019
]
MUG09_14975 (rho)
Transcription machinery [BR:
sass03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MUG09_14975 (rho)
Messenger RNA biogenesis [BR:
sass03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MUG09_14975 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
ATPase_2
AAA_22
Rho_N
AAA_25
AAA
NACHT
Spore_III_AA
OB_RNB
AAA_14
S1CSD-TOTE-2
Zip
Motif
Other DBs
NCBI-ProteinID:
UOM50864
LinkDB
All DBs
Position
complement(3240156..3242036)
Genome browser
AA seq
626 aa
AA seq
DB search
MSSEELVQTEAALSVPSESEKAKKPVRRITRKKSPVAVKASENAADQSAEQQEATDESSQ
QKKRRGRPKKTSVRQRDEKSQMLDEQQPQLDLHVEQQDQPVKEEAPAVVPQPHAASPDET
QPSQKQSEQRSQTQNQNPNQNAYRKNPQFNKGNNRNQQNRHPKGSFQKSQSFGPNRSMRQ
NQNEEPSFDLNIEEHPEAPVLQLELYTNMSIDELRKVGIEKGLSADTILDLRKQEIVAEI
LRIHTASGGVIVGTGTLEILPDGFGFLRSPSNSYLSGLEDVYVSPAQIKSLYLKTGDVVY
GQVRTPRESERFFAILKILKVNGDEPIVAKMRVPFDSLTPLFPDQRLKLETAEEDMSVRI
IDMFCPIGKGQRSLIVAPPRTGKTVLLQKIANSISTNHPEVVLMVLLVDERPEEVTDMRR
HVKGEVIASTFDEQASRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNQTVPAS
GKILSGGVDSNALHKPKRFFGAARNIEFGGSLTIIATGLIETGSRMDEVIFEEFKGTGNN
EIILDRRLADKRLWPAINIKKSGTRREDLLLPPDEAARIWLTRNAVNDMDDQEMTPFLID
KIRKTKDNEAFLRSINTGIPTNSAGY
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgaagaattagtgcaaactgaagctgcgttgtcagtaccttccgagtctgaa
aaggcgaagaaaccggtacggcgtatcacccgaaaaaaaagccctgtggctgtaaaagcg
tcagagaatgctgctgatcagagtgccgagcaacaagaggcgacagacgagtcctcacag
cagaaaaaacgaagaggtaggccaaagaaaaccagcgtgaggcagcgagatgaaaaatct
cagatgcttgacgagcagcaaccgcagctcgacttgcacgttgagcagcaggaccagccg
gtcaaggaagaagctcccgctgttgtaccgcagccccatgctgcttcaccagacgagact
cagccatcgcagaagcagagcgaacagaggagtcaaacccagaatcagaatccgaaccag
aatgcatatagaaagaacccccaattcaataaaggcaacaaccgcaatcagcaaaaccgc
catccaaagggctccttccagaagagccaaagctttggtccgaatcgctcaatgcgccag
aaccagaatgaagaaccctcttttgacttgaatattgaagagcatcctgaagcacccgtt
ctccagcttgaactgtataccaatatgtccatcgatgaactgcgcaaggtgggaatagag
aagggcctgagtgcagataccattctcgacttgcgcaagcaggaaatcgtagctgaaatt
ctgaggatccacactgcaagcggcggcgttattgtagggaccggcacccttgagattctt
cccgacggttttggattccttcgttcaccgtcaaacagctatctctccggactcgaggac
gtctatgtttctcccgcccagatcaagagcctgtatttgaaaaccggggatgttgtctac
ggacaggttcgaaccccgcgtgagagcgaacgcttctttgcgattctcaaaatcctcaag
gtcaacggcgatgagcccatcgtagcaaagatgcgtgttccttttgacagtctgaccccg
ctttttcccgatcagcgattgaaattggagactgctgaagaggatatgtcggtgcgtatc
attgatatgttctgcccgatcggaaagggtcagcgctccttgatcgttgcacccccgaga
accggtaaaaccgtcctgcttcagaaaatcgccaactccatcagtaccaatcatcccgag
gtggttctcatggttcttttggtggatgaacgacccgaggaagtgaccgacatgcgccgt
cacgtcaagggagaggtaatcgcctccaccttcgacgagcaggcaagtcgtcacgtccag
gtcgcggagatggtcattgagaaggccaagcgtcttgttgagcacaagaaggatgtcgtc
attctgcttgactcgatcacccgtctcgcccgcgcctacaaccagacggttcctgcgagc
gggaaaatcctcagcggtggtgtcgactccaatgccctgcataaacccaaacggttcttt
ggagctgcccgtaacattgagttcggcggaagcctcaccattattgcaactggcttgatt
gaaaccggttcgaggatggacgaggttatttttgaagagttcaagggtaccggaaacaat
gagatcattctcgaccgcaggcttgcagacaaacgtctatggccggccatcaacatcaag
aaaagtggaaccaggcgtgaagatctgctgttgcctcctgatgaagctgccaggatctgg
ctcacccgtaatgctgtcaatgatatggacgaccaagagatgactccgttcctcattgac
aaaatccggaagacaaaggataatgaggcgttcttacgctctattaataccgggattcct
acgaactctgcaggctattag
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