Sphaerochaeta associata: MUG09_15130
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Entry
MUG09_15130 CDS
T08141
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sass
Sphaerochaeta associata
Pathway
sass03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sass00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MUG09_15130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sass03021
]
MUG09_15130
03400 DNA repair and recombination proteins [BR:
sass03400
]
MUG09_15130
Enzymes [BR:
sass01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MUG09_15130
Transcription machinery [BR:
sass03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MUG09_15130
DNA repair and recombination proteins [BR:
sass03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MUG09_15130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_A_bac
RNA_pol_L_2
HHH_5
RAD51D_N
UBA_3
THOC7
VWA_3
Motif
Other DBs
NCBI-ProteinID:
UOM50895
LinkDB
All DBs
Position
complement(3277334..3278386)
Genome browser
AA seq
350 aa
AA seq
DB search
MARKNLLKGFKKPKGITFEHSAVEPNYGKFIAYPFERGFGTTIGNTLRRVLLSSIQGYAV
TAVKFTSFNEDGVPHLISSEYEQLPGVREDIADIIAALKKLQIRMPEDSEGTNLLIECKG
PGIVSGANFERDQVEITNKDLVLFTMMDDANIEMEVQIDLGRGYVPSEINEKYVEEIGTI
PIDATFSPVTRVKYSIEPTRVGYRSDYDKLTLEIYTDGTIAPQNALAEAAKIAKEYFQIF
INFDETLISNNDEVDEEEERVRKILNTSVEELELTVRSSNCLKNANIRTIGDLTKKTEEE
IAKTRNFGKKSLQEIKEKLKEWNLSLGMTDYSVLKTAIKVPGNKEEENEA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaaaaaccttctgaagggcttcaagaagcccaaggggataaccttcgaacac
agcgcagttgaaccgaactatgggaaattcattgcctatccgtttgagagaggttttgga
accacgatcggaaacacgctcaggagggtgctcctctcatcgatccaggggtatgccgtc
actgccgtaaagttcaccagcttcaatgaggatggtgttccccacctgatttccagcgag
tatgagcagcttcccggagtccgcgaggatatcgcagacatcattgctgcgttgaaaaag
cttcagatcaggatgcccgaagattcggaggggaccaacctcctcatcgaatgcaagggc
cccggtattgtaagtggcgcaaacttcgagcgtgaccaggttgagatcaccaacaaggat
ttggttctcttcacgatgatggatgatgccaacatcgagatggaagtccagattgacctt
ggtaggggctatgtcccgtctgaaatcaacgagaagtatgtggaagagatcgggaccatc
cccatcgacgccacattctcaccggttacccgcgttaagtattcgattgaacccacccgt
gtcggctatcgcagcgattacgacaagcttacactggaaatctacactgatggtacgatt
gcaccgcagaatgctcttgctgaagctgcaaagattgcgaaggaatacttccagatcttc
atcaacttcgacgagactctgatcagcaataacgatgaggtggacgaagaggaagagagg
gtccgcaagattctcaatacctcggttgaggaactcgagctgaccgttcgatccagcaac
tgtctgaagaatgccaacatccgtactatcggcgatctcaccaagaagactgaggaagag
attgcaaagacgaggaacttcggtaagaagagcctccaagagattaaggaaaaactgaag
gagtggaatctcagccttgggatgaccgactatagtgttctgaaaactgcaatcaaagta
cctgggaacaaggaagaagagaatgaagcatag
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