Sphaerochaeta associata: MUG09_15600
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Entry
MUG09_15600 CDS
T08141
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sass
Sphaerochaeta associata
Pathway
sass03030
DNA replication
sass03430
Mismatch repair
sass03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sass00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MUG09_15600 (dnaE)
03430 Mismatch repair
MUG09_15600 (dnaE)
03440 Homologous recombination
MUG09_15600 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sass03032
]
MUG09_15600 (dnaE)
03400 DNA repair and recombination proteins [BR:
sass03400
]
MUG09_15600 (dnaE)
Enzymes [BR:
sass01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MUG09_15600 (dnaE)
DNA replication proteins [BR:
sass03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MUG09_15600 (dnaE)
DNA repair and recombination proteins [BR:
sass03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MUG09_15600 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
TCAF_helical
Motif
Other DBs
NCBI-ProteinID:
UOM50981
UniProt:
A0ABY4DA26
LinkDB
All DBs
Position
3363423..3366890
Genome browser
AA seq
1155 aa
AA seq
DB search
MSELESEIKVEQSRFVHLHNHTDFSLLDGAAPISRYMAKAKSLGMTSLAITDHGNMFGAL
RFYYAAKDAGINPIIGCEFYCNPPSHTERPAPGGRKPNQYHLILLAMNEKGYHNLMELNS
ISYTQGFYFKPRIDDELLVKYNEGLICLSACLGGEILQHLLNDQYDKAKQRALWFSSVFD
DGRYYLEMQDHNLAEQKRTNPLLKQLSDETGIPLVCTNDIHYIEKDDANAQDLLLCVGTN
SKKNDPDRMRFPNQEFYMKSEEQMTSLFSWCPEAVENTSRIAERCNLEIHLPGPLLPDFD
VPRGFEGPAAYLRHLSHEGLKKRYKHVTEDLTKRLDYELDVIINMKFEGYFLIVMDYIQW
AKQHDIPVGPGRGSGAGSLVAYSIEITDVDPIKYNLLFERFLNPERVSMPDFDIDFCFER
RQEVINYVTEHYGTERVAQIATFGTLKAKAVVKDVARVLDIPFDESNNICKLIPDDPKMT
LAKAFEQNKELVELEQKGGVYAELFDAARRLEGLNRHTSTHAAGVVIGKEELVNYVPLYR
DAKTGAISTQYTMDLIEECGLVKMDFLGLKTLTLIKHTEDLIHKKDPNFTSTAIDEEDPK
TFEMLCRGESTAVFQFESQGMQNILKEAKPSNIEDLVALNALYRPGPMAYIPQFINCKLG
RQPITYANPELEEELKTTYGVIVYQEQVMKVAQIIAGYSLGSADILRRIMGKKKVAALEK
EKVKFIAGAKALGRSEQHAAEIFEMLEPFAGYGFNKSHAVAYSVVAYQTAFLKANYPAEF
WAANLTNEMNSPDKFSEYLQVAKDQGLEILPPSVNYSDKHFSVVDGKIVYGLAGIKNVGE
GVVELLVQEREKSGPYKDLLDFLTRLEAKAMNTKLLESLIKAGAFDSMGTNRPTLLENLS
DAIVYVQKRKEATAFGQISLFDEETEASMETFSMKPVEDWKLPEKLEMEKGLLGFYISGH
PLDAFAQAINQRVTANTAHLETIGFNRPTNIIAMVSSIRPFTTQKGGIMAFLQLTDRNAT
FDATLFPKIFEQYRDMLHVDGIYGFVGKFDNSRGNDKISYLIEQIFEDPNQLAPIAVSRC
HIELEKSFCSTEQISHLRDTCLTYGGSCSVLLHFKTEGESMPLVVECGREFSVRYCDEIE
TAVKENPSVLNIWFD
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagcttgagtccgaaatcaaagtagagcagagtcgattcgtccatctgcacaac
cacaccgacttctccctcctcgacggagccgcccccatcagccgctacatggcaaaggcg
aaaagcctcggcatgacgagcctggccatcaccgatcatgggaatatgttcggcgcattg
cgcttctattacgcggccaaggatgccggcatcaatccgatcatcggttgtgaattctac
tgcaatccaccctctcataccgagcgccccgcccccggcggtcgaaaacccaatcagtac
cacctcattctccttgcaatgaacgagaaaggctaccacaacctgatggagctcaactcc
atctcgtacacccaggggttctacttcaagccccgcatcgacgacgagcttctggtaaaa
tacaacgaagggctcatctgcctttctgcctgcctgggtggggaaatcctgcagcacctg
ctcaacgaccaatacgacaaggcaaagcaacgcgcactttggttctcttcggttttcgac
gacggacgctactatctggaaatgcaggaccacaaccttgccgagcagaagcgcaccaac
cccctgctcaagcagctcagcgatgagaccggcatccccctcgtctgtaccaacgacatc
cactacatagaaaaggatgacgccaatgcccaggacctgctgctctgcgtaggcaccaac
tccaaaaagaacgatccggatcgcatgcggttccccaaccaggaattctacatgaaaagt
gaagagcagatgacctccctcttcagctggtgtcctgaggctgtggaaaataccagcaga
atcgccgagcgatgcaacctcgaaattcacctcccaggcccgctgttgcccgacttcgat
gttccccggggctttgaaggcccggcggcgtatttgcgccatctctcccatgaagggttg
aaaaagcggtataaacacgtcaccgaggatttgacaaaacggttggattatgagctggat
gtcatcattaacatgaagttcgaggggtactttctcatcgtcatggactacatccagtgg
gcgaagcagcacgacatacccgtcggaccggggcgtggatcgggtgcaggatccttggtt
gcatactccatcgaaattaccgatgtcgacccgatcaagtacaacctcctgttcgaacga
ttcctcaatcccgaacgggtgagcatgcccgacttcgatatcgacttctgcttcgaacga
aggcaggaggtcatcaactatgtaaccgagcactatggaacagagcgggtcgcccagatc
gccacgttcggaaccctgaaggccaaggccgtcgtcaaggacgtcgcccgagttctggat
attcccttcgacgaatcgaacaatatctgcaaactcatccccgacgaccccaaaatgacg
ctcgccaaggcgtttgaacagaataaggaactggttgaactggaacagaaaggcggcgta
tatgccgagctgttcgatgcagcacgacgtctggagggtttgaacaggcatacatcaacc
cacgcagccggagtggtcatcggcaaggaggagctggtaaactatgtcccgctctatcgt
gatgccaaaaccggtgccatctccacccaatacaccatggatctcattgaagagtgcggc
ctggtgaaaatggactttctgggactgaagaccttgaccctgatcaagcacaccgaggac
ctgatccacaagaaggatccaaacttcaccagcactgcaatcgatgaggaggaccccaaa
acctttgagatgctctgtcggggggagagcaccgccgtcttccagtttgaaagccaggga
atgcagaacatcctcaaagaggcaaaaccctccaatatcgaggacctggtcgccctcaac
gccctctatcgtcccggcccgatggcctatatcccacagttcatcaactgcaagcttggc
cgccaacccatcacctatgcaaacccggagttggaagaggagctgaagaccacatacggg
gtcatcgtctatcaggaacaggtcatgaaggtggcccagatcattgccggctactcgctt
ggcagtgctgatattctcaggcgcatcatgggtaagaagaaagtcgccgcacttgagaag
gagaaggtgaagttcatagccggggcgaaagccctcggtcgcagcgagcagcatgccgca
gaaatcttcgagatgctcgagcccttcgccgggtacggtttcaacaagagccatgcggtg
gcctactcggtcgtagcgtaccagaccgccttcctcaaggcaaactacccagccgagttc
tgggcggccaacctgaccaacgagatgaacagccccgacaagttcagcgagtatctgcag
gtggcgaaggaccaaggccttgagatccttcccccttcggtcaactactcggacaagcac
ttctctgttgtggacggcaagatcgtctacggccttgccggcatcaagaatgtcggggag
ggggtggtcgagctgttggtgcaggaacgggagaagagcggcccctacaaggacctgctg
gactttttgacccgactcgaggcgaaggccatgaacaccaagctgttggaatctctgatc
aaggcgggagccttcgacagcatgggaaccaaccgccccaccttgttggaaaacctcagc
gatgccatcgtttatgtacaaaagcgcaaggaggcaaccgccttcggtcagatttccctc
ttcgacgaggagacggaagcctcgatggagaccttcagcatgaaaccggtcgaggactgg
aagcttcctgaaaaactggaaatggagaaaggccttttgggtttctacatctcaggccat
cccttggatgcctttgctcaagcaataaaccagcgggtgacggccaacaccgcccacttg
gagacaatcgggttcaaccggcccaccaacatcattgccatggtcagctcgatcaggccc
ttcaccacccaaaagggaggtatcatggcctttttacagctcaccgaccgcaatgcaacc
ttcgatgcaaccttgttccccaagattttcgagcagtatcgtgacatgctgcatgtcgat
ggcatctatggatttgtcggtaaattcgacaactccagaggcaatgataaaatttcctat
ctgattgaacagatattcgaggatcccaaccagttggccccgattgccgtttcgcgttgc
cacattgagttggagaagtccttttgcagtactgaacagatttcccatctgagggacacc
tgcctcacctatggaggtagctgcagcgtcctgctccacttcaagaccgaaggggaaagc
atgcccctggtcgtcgagtgcggccgagaattctcggtccggtactgcgatgagattgaa
acggcggtgaaggaaaatccctcggtgctgaatatttggttcgactaa
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