Streptomyces calvus: CD934_08295
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Entry
CD934_08295 CDS
T06819
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sast
Streptomyces calvus
Brite
KEGG Orthology (KO) [BR:
sast00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sast03009
]
CD934_08295 (rimO)
Enzymes [BR:
sast01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CD934_08295 (rimO)
Ribosome biogenesis [BR:
sast03009
]
Prokaryotic type
ribosomal protein modification factors
CD934_08295 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
QDI68684
UniProt:
A0A514JMY0
LinkDB
All DBs
Position
complement(2056473..2057948)
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AA seq
491 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLEADGWELVEDAEEADVAVVNTCGFVEAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISDRLQTIL
NGGIHASHTPRDRRKLLPISPAERQDSAASVALPGHAPADLPEGLAPASGPRAPLRRRLD
GSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEIMLVSENNT
SYGKDLGDIRLLESLLPELAEVDGLERVRVSYLQPAEMRPGLIDVLTSTPKVAPYFDLSF
QHSAPDVLRAMRRFGDTDRFLELLDTIRSKAPQAGVRSNFIVGFPGESEADLAELERFLN
HARLDAIGVFGYSDEEGTEAATYDGKLDEDVVAERLARVSRLAEELVSQRAEERVGETVR
VLVESVDEAEGVYGRAEHQAPETDGQVLLTSGEGLRVGRMVEAKVVGTEGVDLVAEPLFE
GSLACSEEAGR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgccgtaccgtcgcactggtcacccttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgtttggaggcggacggctgggagctcgtggaggacgccgag
gaagccgacgtcgccgtcgtcaacacctgcggcttcgtcgaggccgccaagaaggactcc
gtcgacgcgctcctggaggccaacgacctcaagggacacgggagaacgcaggccgtcgtg
gcggtcggctgcatggccgagcggtacggcaaggaactcgccgaggccctccccgaggcc
gacggcgtgctcggcttcgacgactacgccgacatctccgaccgcctccagaccatcctc
aacggcggcatccacgcctcccacaccccgcgcgaccggcgcaagctgctgccgatcagc
ccggccgagcggcaggactccgccgcctccgtggcgctgccgggccacgccccggcggat
ctgccggagggcctcgccccggcctccgggccccgcgcgcccctgcgccgccggctcgac
ggctccccggtcgcctcggtgaagctcgcctccggctgcgaccggcgctgctccttctgc
gccatcccgtccttccgcggctccttcatctcgcgccgtcccagcgacgtgctgaacgag
acccgatggctcgccgaacagggcgtgaaggagatcatgctggtctccgagaacaacacc
tcctacggcaaggacctcggcgacatccgcctgctggagtccctgctgcccgagctggcc
gaggtcgacgggctggagcgggtccgcgtcagctacctgcagccggccgagatgcggccc
ggcctgatcgacgtgctgacctccaccccgaaggtcgccccgtacttcgacctgtcgttc
cagcactccgcgccggacgtgctgcgcgcgatgcgccgcttcggcgacaccgaccggttc
ctggaactgctcgacacgatccgcagcaaggcgccccaggccggtgtgcgctccaacttc
atcgtcggcttccccggtgagtccgaggcggacctcgccgagctggagcgcttcctgaac
cacgcgcgcctggacgccatcggcgtcttcggctactccgacgaggagggcaccgaggcg
gcgacctacgacggcaagctcgacgaggacgtcgtcgccgagcgcctggcccgggtctcc
cggctggcggaggaactcgtctcgcagcgtgccgaggagcgggtcggggagaccgtgcgg
gtgctggtggagtccgtggacgaggcggagggcgtgtacggccgggcggagcaccaggcg
cccgagacggacggccaggtgctgctcacgagcggcgagggtttgcgcgtcggccgtatg
gtcgaggcgaaggtggtcggcacggagggtgtcgacctggtggccgagccgctgttcgag
ggttcgctcgcgtgtagtgaggaggcgggcagatga
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