Streptomyces calvus: CD934_15165
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Entry
CD934_15165 CDS
T06819
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sast
Streptomyces calvus
Brite
KEGG Orthology (KO) [BR:
sast00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sast03032
]
CD934_15165 (gyrB)
03400 DNA repair and recombination proteins [BR:
sast03400
]
CD934_15165 (gyrB)
Enzymes [BR:
sast01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CD934_15165 (gyrB)
DNA replication proteins [BR:
sast03032
]
Prokaryotic type
DNA Topoisomerases
CD934_15165 (gyrB)
DNA repair and recombination proteins [BR:
sast03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CD934_15165 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
QDI69888
UniProt:
A0A514JTA8
LinkDB
All DBs
Position
3603901..3605985
Genome browser
AA seq
694 aa
AA seq
DB search
MLCQKGRFVADSGNPNENIPSTDTGVGDAASTSTGEGATSYDATAITVLEGLDAVRKRPG
MYIGSTGERGLHHLVQEVVDNSVDEALAGHADTIDVTILADGGVRVVDNGRGIPVGIVPS
EGKPAVEVVLTVLHAGGKFGGGGYAVSGGLHGVGVSVVNALSTRVAVEVKTDGYRWTQDY
KLGVPTAPLAKHEATEETGTSVTFWADGDIFETTDYSFETLSRRFQEMAFLNKGLRINLT
DERESAKATAGADEAGEDEKHEVKTVSYHYEGGIVDFVKYLNSRKGDPVHPTVIDLEAED
KDRHLSLEVAMQWNGGYTEGVYSFANIIHTHEGGTHEEGFRAALTSLINKYARDKKLLRE
KDDNLTGDDIREGLTAIISVKLSEPQFEGQTKTKLGNTEVKTFVQKVVYEHLNDWLDRNP
NEAADIVRKGIAAATARVAARKARDLTRRKGLLETASLPGKLSDCQSNDPTKCEIFIVEG
DSAGGSAKSGRNPQYQAILPIRGKILNVEKARIDRILQNQEIQAMISAFGTGVHEDFDIE
KLRYHKIILMADADVDGQHINTLLLTFLFRFMRPLVEAGHVFLSRPPLYKIKWGKDDFEY
AYSDRERDALIEMGRNAGKRIREDSVQRFKGLGEMNAEELRITTMDQEHRVLGQVTLDDA
AQADDLFSVLMGEDVEARRAFIQRNAKDVRFLDI
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtgccagaaagggcgcttcgtggccgattccggcaaccccaacgagaacatcccg
tccaccgacaccggcgtcggcgacgcagcgagcacctcgaccggcgagggcgccacgtcg
tacgacgccaccgccatcaccgtcctcgagggcctggacgcggtccgtaagcgacccggc
atgtacatcgggtcgaccggcgagcggggactgcaccacctggtgcaggaggtcgtcgac
aactcggtcgacgaggcgctggccggccatgcggacaccatcgacgtcacgatcctggcg
gacggcggcgtgcgcgtcgtcgacaacggccgcggcatcccggtgggcatcgtcccctcc
gagggcaagcccgccgtcgaggtcgtcctgaccgtgctgcacgcgggcggcaagttcggc
ggcggcggctacgcggtctccggcggtctgcacggcgtgggcgtctccgtggtcaacgcg
ctgtcgacgcgggtcgccgtcgaggtcaagaccgacggctaccgctggacgcaggactac
aagctgggtgtccccaccgcgcccctcgccaagcacgaggccaccgaggagaccggcacg
tcggtcaccttctgggccgacggtgacatcttcgagaccaccgactactccttcgagacg
ctctcccggcgcttccaggagatggccttcctcaacaagggcctgaggatcaacctcacc
gacgagcgcgagtcggcgaaggccaccgccggcgcggacgaggcgggcgaggacgagaag
cacgaggtcaagaccgtctcgtaccactacgagggcggcatcgtcgacttcgtgaagtac
ctcaactcccgcaagggcgacccggtgcaccccaccgtgatcgacctggaggccgaggac
aaggacaggcacctgtccctcgaggtcgcgatgcagtggaacggcggctacacggagggc
gtgtactccttcgccaacatcatccacacccacgagggcggcacgcacgaggagggcttc
cgcgcggcgctcacctcgctcatcaacaagtacgcgcgcgacaagaagctgctgcgcgag
aaggacgacaacctcacgggtgacgacatccgcgagggtctgaccgcgatcatctcggtc
aagctgagcgagccgcagttcgagggccagaccaagaccaagctgggcaacaccgaggtg
aagaccttcgtgcagaaggtcgtctacgagcacctcaacgactggctggaccgcaacccc
aacgaggccgcggacatcgtccgcaagggcatcgcggcggccaccgcgcgggtggcggcc
cgcaaggcgcgcgacctgacccgccgcaagggcctgctggagaccgcctctctgccgggc
aagctctccgactgccagtcgaacgaccccaccaagtgcgagatcttcatcgtcgagggt
gactccgccggcggctcggccaagtccggccgcaacccgcagtaccaggcgatcctcccg
atccgcggcaagatcctcaacgtcgagaaggcgcgcatcgaccggatcctgcagaaccag
gagatccaggcgatgatctccgcgttcggcacgggcgtgcacgaggacttcgacatcgag
aagctccgctatcacaagatcatcctgatggcggacgccgacgtcgacggccagcacatc
aacaccctgctcctgacgttcctgttccgcttcatgcggccgctggtcgaggccgggcac
gtgttcctctcccgtccgccgctctacaagatcaagtggggcaaggacgacttcgagtac
gcgtactccgaccgcgagcgcgacgcgctgatcgagatgggccgcaacgccggcaagcgc
atccgcgaggactccgtccagcgcttcaagggactcggcgagatgaacgccgaggagctg
cgcatcaccacgatggaccaggagcaccgcgtcctcggccaggtcaccctggacgacgcc
gcccaggccgacgacctgttctcggtcctgatgggcgaggacgtcgaggcccgccgcgcg
ttcatccagcgcaacgccaaggacgtccgcttcctcgacatctga
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