Streptomyces calvus: CD934_25820
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Entry
CD934_25820 CDS
T06819
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
sast
Streptomyces calvus
Pathway
sast03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sast00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CD934_25820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sast03400
]
CD934_25820
DNA repair and recombination proteins [BR:
sast03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CD934_25820
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CD934_25820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
RsgA_GTPase
nSTAND1
AAA_16
AAA_33
AAA_25
AAA_22
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
QDI71714
UniProt:
A0A514JWD6
LinkDB
All DBs
Position
6005705..6008716
Genome browser
AA seq
1003 aa
AA seq
DB search
MADRLIVRGAREHNLKNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPECSRPISRQSPQAIVDKVLELPEGSRFQVLSPLVRERKGEFVDLFADLQTKGYSRARV
DGETVQLSNPPTLKKQEKHTIEVVVDRLTVKDSAKRRLTDSVETALGLSGGMVVLDFVDL
PEDDPERERMYSEHLYCPYDDLSFEELEPRSFSFNSPFGACPECTGIGTRMEVDPELIVP
DPDKSLDEGAIHPWSHGHTKDYFDRLVGALADALGFRTDIPFGGLPQRARKALLHGHKTQ
VEVRYRNRYGRERRYTTAFEGAVPFVKRRHSEAESDASRERFEGYMREVPCPTCEGTRLK
PIVLAVTIMGKSIAEVSAMSISDCADFLRELKLTARDKKIAERVLKEVNERLRFLVDVGL
DYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRLR
DMGNTLIVVEHDEDTIKVADWIVDIGPGAGEHGGKVVHSGSLKELLANTESQTGQYLSGK
KAIPLPDVRRPHDPSRRLTVHGARENNLQDIDVSFPLGVFTAVTGVSGSGKSTLVNDILY
THLARELNGARSVPGRHTRVDGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHVRKLFA
ETTEAKVRGYMPGRFSFNVKGGRCENCAGDGTIKIEMNFLPDVYVPCEVCHGARYNRETL
EVHYKGKSIADVLNMPIEEAMHFFEAVPAISRHLRTLNDVGLGYVRLGQSATTLSGGEAQ
RVKLASELQKRSTGRTVYVLDEPTTGLHFEDISKLLKVLSGLVDKGNTVIVIEHNLDVIK
TADWVVDMGPEGGSGGGLVVAEGTPEQVAGVPASHTGKFLREILGAERISDATQVRAPRK
AAAKKAVAAKAGTRRTATRTVDGTVAKRTTKAAAKKTTRGTKA
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccgtctcatcgtccgtggagcgcgcgagcacaacctcaagaacgtctcgctc
gacctcccgcgcgactcgctcatcgtcttcacgggcctgtcggggtcgggcaagtcctcg
ctggccttcgacaccatcttcgccgaggggcagcggcgctacgtcgagtcgctctcctcg
tacgcccggcaattcctcggccagatggacaagccggacgtcgacttcatcgagggcctg
tccccggcggtctccatcgaccagaagtcgacctcgcgcaacccgcgctccacggtcggc
accatcaccgaggtctacgactacctgcgcctgctcttcgcccgcatcggcaagccgcac
tgccccgagtgctcccggccgatctcccgccagtcgccgcaggccatcgtcgacaaggtg
ctggaactgcccgagggcagccggttccaggtgctctccccgctggtgcgcgagcgcaag
ggcgagttcgtcgacctgttcgccgacctccagaccaagggctactcccgcgcgcgcgtg
gacggcgagaccgtccagctgtccaacccgcccacgctgaagaagcaggagaagcacacc
atcgaggtggtcgtggaccgcctcaccgtgaaggactccgcgaagcgccgcctcaccgac
tccgtggagaccgcgctcggcctgtccggcggcatggtcgtgctcgacttcgtcgacctc
cccgaggacgaccccgagcgcgagcgcatgtactccgagcacctctactgcccgtacgac
gacctgtccttcgaggagctggagccccgctccttctccttcaactcgcccttcggcgcc
tgccccgagtgcaccggcatcggcacgcgcatggaggtcgacccggagctgatcgtcccc
gacccggacaagagcctcgacgagggcgccatccacccgtggtcgcacggccacaccaag
gactacttcgaccgcctcgtcggcgccctcgcggatgcgctgggcttccgcaccgacatc
cccttcgggggactgccgcagcgcgccaggaaggcgctgctgcacggccacaagacccag
gtcgaggtccgctaccgcaaccgctacggacgcgagcgccggtacacgacggccttcgag
ggagccgtccccttcgtcaagcgccggcacagcgaggccgagagcgacgccagccgggag
cggttcgagggctacatgcgcgaggtgccctgccccacctgtgagggcacgcgactgaag
ccgatcgtcctcgcggtcacgatcatgggcaagtccatcgccgaggtctccgcgatgtcg
atcagcgactgcgcggacttcctgcgcgagctgaagctgaccgcccgcgacaagaagatc
gccgagcgcgtgctcaaggaggtcaacgaacggctgcggttcctggtcgacgtcggcctg
gactacctctcgctgaaccgcgcggcgggcaccctctccggcggcgaggcccagcgcatc
cgcctggccacccagatcggctccgggctcgtcggcgtgctctacgtcctcgacgagccg
tccatcggcctgcaccagcgcgacaaccaccggctgatcgagacgctggtccggctgcgc
gacatgggcaacacgctcatcgtcgtggagcacgacgaggacaccatcaaggtcgccgac
tggatcgtcgacatcggtcccggcgccggcgagcacggcggcaaggtcgtgcacagcggc
tccctgaaggagctcctcgccaacaccgagtcgcagaccggccagtacctgtccggcaag
aaggccatcccgctgcccgacgtccgccgcccgcacgacccgtcgcgccggctcacggtg
cacggcgcccgcgagaacaacctccaggacatcgacgtgtccttcccgctgggcgtgttc
accgcggtcaccggcgtgtccggctccggcaagtcgacgctggtcaacgacatcctgtac
acgcacctggcgcgcgagctgaacggcgcccgcagcgtccccggccggcacacgcgcgtg
gacggcgacgacctcgtcgacaaggtcgtccacgtcgaccagtcgcccatcggccgcacc
ccgcggtccaacccggcgacgtacaccggtgtcttcgaccacgtgcgcaagctgttcgcc
gagacgacggaggcgaaggtccgcggctacatgccgggccggttctccttcaacgtcaag
ggcggccgctgcgagaactgcgcgggcgacggcaccatcaagatcgagatgaacttcctc
ccggacgtgtacgtcccgtgcgaggtctgccacggcgcccgctacaaccgggagaccctg
gaggtccactacaagggcaagtcgatcgccgacgtcctgaacatgccgatcgaagaggcc
atgcacttcttcgaggcggtcccggcgatctcccgccacctgaggacgctcaacgacgtc
ggcctcggctacgtccggctcggccagtccgcgacgaccctgtccggcggtgaggcgcag
cgcgtgaagctcgccagcgaactgcagaagcgctccaccggccgcaccgtctacgtcctg
gacgagccgaccaccggcctgcacttcgaggacatcagcaagttgctgaaggtgctgtcc
ggcctcgtcgacaagggcaacacggtcatcgtcatcgagcacaacctcgacgtgatcaag
accgccgactgggtcgtcgacatgggccccgagggcggttccggcggtggcctggtcgtc
gcggagggcacgccggagcaggtcgcgggcgttcccgccagccacaccggcaagttcctg
cgggagatcctgggggcggagcggatcagcgacgccacccaggtgcgggccccgcgcaag
gccgcggcgaagaaggcggtcgcggccaaggccggcacccggaggaccgccaccaggacg
gtcgacggcacggtcgccaagcgcaccaccaaggccgccgcgaagaagacgacgcggggc
accaaggcctga
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integrated database retrieval system
