Streptomyces calvus: CD934_26215
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Entry
CD934_26215 CDS
T06819
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sast
Streptomyces calvus
Pathway
sast00040
Pentose and glucuronate interconversions
sast01100
Metabolic pathways
sast02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sast00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CD934_26215
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CD934_26215
Enzymes [BR:
sast01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CD934_26215
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
QDI71790
UniProt:
A0A514JWJ7
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Position
6097196..6098527
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AA seq
443 aa
AA seq
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MNRPIWHGHAITRAASLAGCTALVLALTGTGAQAHSPAHHPDPARQTLGAGDGWAAHGTG
TTGGADADAEHVYTVTDWAGFKAALTAGGTAPRIIKVKGTIDAVSQGCEAFAAPGYDFDA
YLEKYAPETWGLEQDLSAEPDDSPEGLRRASAARQDTAIKANIPADTTIIGVGRNAGIKG
ASLQIRGVDNVIVRNLTLESPVDCFPQWDPTDGSKGNWNSEYDTAVVYGSTHVWLDHNTF
TDGEHPDSEAPTYFGMLYQQHDGELDIVRGANYVTASWNVFTEHDKTILIGNSDGESTAV
GDRGKLKATFHHNLFSNLVERAPRVRFGQVDVYNNHFVADAGYSYSFGIGKESQLVAEHN
AFTLPEGISPAKILKRWNDSPLTAAHNRVNGRSTDLIAVHNAEIPQETLRSGAGWTPALR
AAVHPARAVPALVKHHAGAGRVR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagaccgatatggcatgggcatgccattaccagagccgcctcgctggccggctgc
accgccctcgtgctggccctgaccggcaccggcgcccaggcgcactcccccgcgcaccac
cccgaccccgcccgccagacgctgggcgccggcgacggctgggccgcccacggcaccggc
accaccggcggcgcggacgccgacgccgagcacgtgtacaccgtcaccgactgggccggg
ttcaaggcggccctgacggccggcggcacggcgccgaggatcatcaaggtgaaggggacc
atcgacgcggtctcccagggctgcgaggcgttcgccgcgcccggctacgacttcgacgcc
tacctggagaagtacgcgccggagacctggggcctggagcaggacctgagcgccgagccc
gacgacagcccggaaggactgcgcagggcctccgccgcccggcaggacaccgccatcaag
gcgaacatcccggccgacaccaccatcatcggcgtcggccggaacgccggcatcaagggc
gccagcctgcagatccgcggcgtcgacaacgtcatcgtccgcaacctcaccctggagagc
ccggtcgactgcttcccccagtgggacccgaccgacggcagcaagggcaattggaactcc
gagtacgacaccgccgtcgtgtacggctccacccacgtctggctggaccacaacaccttc
accgacggcgagcaccccgacagcgaggccccgacgtacttcggcatgctgtaccagcag
cacgacggcgaactggacatcgtccggggcgcgaactacgtcaccgcctcctggaacgtc
ttcaccgagcacgacaagacgatcctgatcggcaacagcgacggcgagtccaccgccgtc
ggcgaccggggcaaactcaaggccaccttccaccacaacctgttctcgaacctggtcgag
cgcgcgccgcgggtccgcttcggacaggtcgacgtgtacaacaaccacttcgtcgccgac
gccggctactcctacagcttcggcatcggcaaggagtcccagctcgtcgccgagcacaac
gcgttcacgctgcccgagggcatcagcccggcgaagatcctcaagcgctggaacgactca
ccgctcaccgccgcgcacaaccgcgtcaacggccggagcaccgacctcatcgccgtgcac
aacgcggagatcccgcaggagaccctgcgctccggcgccggatggacccccgccctgcgc
gccgccgtccacccggcccgtgccgtcccggccctggtgaagcaccacgcgggcgccggc
cgcgtccgctga
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