Syntrophus aciditrophicus: SYN_00027
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Entry
SYN_00027 CDS
T00346
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sat
Syntrophus aciditrophicus
Pathway
sat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SYN_00027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sat03019
]
SYN_00027
03110 Chaperones and folding catalysts [BR:
sat03110
]
SYN_00027
03029 Mitochondrial biogenesis [BR:
sat03029
]
SYN_00027
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sat04147
]
SYN_00027
Enzymes [BR:
sat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SYN_00027
Messenger RNA biogenesis [BR:
sat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SYN_00027
Chaperones and folding catalysts [BR:
sat03110
]
Heat shock proteins
HSP60 / Chaperonin
SYN_00027
Mitochondrial biogenesis [BR:
sat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SYN_00027
Exosome [BR:
sat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SYN_00027
Exosomal proteins of other body fluids (saliva and urine)
SYN_00027
Exosomal proteins of breast cancer cells
SYN_00027
Exosomal proteins of colorectal cancer cells
SYN_00027
Exosomal proteins of bladder cancer cells
SYN_00027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
divDNAB
DUF5021
Motif
Other DBs
NCBI-ProteinID:
ABC75928
UniProt:
Q2LPJ8
LinkDB
All DBs
Position
complement(52916..54550)
Genome browser
AA seq
544 aa
AA seq
DB search
MAAKEIKYDSVARDKVMKGVDTLANAVKVTLGPRGRNVVIEKAWGGPTITKDGVTVAKEI
ELEDKFENMGAQMVREVASKTSDMAGDGTTTATILAQAIYREGTKLAAAGMNPMSLKRGI
DKSVQLVIDELKKISKDIRDKKEITQVGTISANNDNTIGEIISEAMEKVGKEGVITVEEA
KGMETTLEIVEGMQFDRGYVSPYFVTDPEKMEVVMEDPYILLYDKKISVMQDLVPILEQI
ARSGRPMLIVSEDLEGEALATLVVNNIRGTLKCAAVKAPGFGDRRKAMLEDIAILTGGKV
VSEELGIKLDSITLTDLGTCKRLHITKDNTTIVDGAGSQADIEGRVKQIRTQIEETTSDY
DREKLQERLAKLVGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVEEGIVPGGGVALL
RTLPALAGMDLPDDERPGLNIVKRAVEEPMRQIAANAGFEGSIVVEKVKENTGNFGFNAD
TEKYVDMMEAGIIDPTKVVRFALQNAASVASLLLTTEAMIAEAPKKKGAGMPGGMPPDMG
DMEY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagagatcaaatatgattcggtcgcccgggataaagtcatgaagggcgtg
gataccctggccaatgcggtgaaggtcactcttggtccccggggacggaatgtcgtgatt
gaaaaagcctggggaggtccgaccattaccaaggacggggtcacggtagccaaggaaatc
gaactggaagacaaatttgaaaacatgggcgctcagatggtccgagaagtggcgtccaaa
acctcggatatggccggcgatggaaccaccacggccaccatcctcgcccaggcgatttac
cgtgaaggaaccaaactcgccgccgccggcatgaatcccatgtcgctcaagaggggcatt
gacaagagcgtgcaactcgtcatcgacgaattgaaaaagatctccaaggacatccgggac
aaaaaggagatcacccaggtcgggaccatttccgcaaacaacgataatacaatcggtgag
atcatttccgaagccatggaaaaggtcggcaaggaaggcgtcatcaccgtcgaagaagcc
aaaggcatggagaccacactggaaatcgtggaaggcatgcagttcgaccgcggttatgtt
tccccatatttcgtgacggatccggaaaagatggaagtcgtcatggaggatccctacatt
ctgctttatgataagaaaatcagcgtcatgcaggacctggtgcccattctggaacagatc
gcccgttccggaaggcccatgctcatcgtgtccgaagatcttgaaggagaagccctggcc
acgctggtggtgaacaacatccggggcaccctcaagtgcgcggccgtcaaggcgccgggg
ttcggtgatcggcgaaaggccatgctggaagatatcgccattctcaccggcggcaaggtc
gtctctgaagaactgggcatcaaactggacagcattacactgaccgatctggggacctgc
aaacggctgcatatcaccaaggacaacaccacgattgtggatggcgcgggcagtcaggcc
gacatcgaagggcgggtcaagcagattcgcacacagatcgaggaaacgacatccgattac
gatcgggaaaagcttcaggagcggctggccaaactggtgggcggtgtcgccgtgatcaaa
gtcggtgcggcaacggaaattgaaatgaaggagaaaaaggcgcgggtggaagacgccctc
catgccacgcgggcggcggtggaagaaggcatcgtccccggaggcggtgtcgccctgctg
cggacccttccggcccttgcaggcatggatcttcccgatgatgagcggcctggcctgaat
atcgtcaaacgggccgtcgaggaacccatgcgccagattgccgcaaatgccggtttcgaa
ggatccatcgtcgtcgagaaggtgaaggagaacaccgggaatttcggtttcaatgccgat
accgaaaaatacgtggacatgatggaagccggcatcatcgatcccaccaaggttgtccgt
tttgcccttcagaacgcggcgtccgtggcatctctgctcctgacgaccgaggccatgatc
gccgaagcgcccaagaaaaagggagccgggatgcccggtggcatgcctcccgacatgggc
gatatggaatactga
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