| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase beta chain
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| KO |
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| Organism |
sat Syntrophus aciditrophicus
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:sat00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SYN_00064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:sat03021]
SYN_00064
03400 DNA repair and recombination proteins [BR:sat03400]
SYN_00064
Enzymes [BR:sat01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SYN_00064
Transcription machinery [BR:sat03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SYN_00064
DNA repair and recombination proteins [BR:sat03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SYN_00064
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
302807..306898
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| AA seq |
1363 aa
MGEFRKNFGRIEEILEVPNLIDIQTRSYETFLQEDVAPENRKNFGLQGAFKSVFPISDFS
GKCSLEFVSYKIGAVRYDVNECIQKGMTYAAPLKIVVRLVVFDTDRLSDQKNIRDIKEQE
IYFGEIPLMTEKGTFIVNGTERVIVSQLHRSPGIFFDHDKGKTLTSGKLIYSARIIPIRG
SWLDLEFDSKDLLYVRIDRRRKMPVTILLKAMGYSTEDLLNYFYDVEHIFCEGENFYAAV
DESLVGHKLYDDIRDINTGEILFKKGRRINKVILKRIREQRVERIKMDVEELPGRILATD
ILDPETGEVLFHCNEALSAAGIDVVREKGIRELSVINLGEDLSNVSIRDTLLIDRMETPG
DAIIEIYRRLRPSNPPTPDTAQKFFNSLFFENESYDLSTVGRAKMNYKLRLDVSTDVTVL
RKEDIMAAVKYLIDLKNGVPECSVDDIDHLGNRRVRSVGELIENQYRIGLVRMERAIKEK
MSLQDIETMMPHDLVNVKPVSAVVSEFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGL
TRERAGFEVRDVHPTHYGRICPVETPEGPNIGLIVSLSTYARVNEFGFIETPYRIVKEGR
VLPEVKFLTAIEEENQVIAPADQPVNHDGSFKGDLISARKGGDFVNVVPSEVNMVDVSPN
QLVSVAATLIPFLEHDDANRALMGSNMQRQAVPLMRPEIPLVGTGMERIVARDSGAVVVA
KRSGIVESVDASRIVIKCESAEKTDRDTGVDIYTLIKYQRSNQDTCFNQKAIVNKGQRVR
KGDIIADGPATDNGELALGHNVMVAFMSWGGYNYEDSILVSERIVKEDIYTSIHIEEFET
MARDTKLGKEDITRDIPNVGEEALRNLDDSGIVRMGVSVKSGDILVGKITPKGETQLSSE
EKLLRAIFGEKASDVRDTSLRVPPGVEGTVIDAKVFTRKGAEKDHRSQYIEDEAIAMLQK
DREDEIRIITEAVKKEVGTLLQGKQSGAKIVDPKRKKIYLKKGDIITPEILSEIPLHLWK
EITVADDEETERAVGQMMANLYDKIEVVEAYFNEKTEKLKASDELPPGVIKMVKVYIAIK
RKLQAGDKMAGRHGNKGVLSRILPEEDMPYFKDGRPVDIVLNPLGVPSRMNVGQILETHL
GWAAKGLGEKLNDMLDSYQKGNQLRDELKGIYQSREFEKFVDGATEEETYQFVRKLRRGI
AVSSPVFDGATESDIRNMLKLANLPSTGQAILYDGRTGEPFDQEITVGMIYMLKLHHLVD
NKIHARSIGPYSLVTQQPLGGKAQFGGQRLGEMEVWAMEAYGAAYSLQEFLTVKSDDVAG
RTRIYEAIVKGENTSEPGLPESFNVLVKELQSLCLDVELIEEE |
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| NT seq |
4092 nt +upstreamnt +downstreamnt
atgggcgagtttagaaaaaatttcggccgaattgaagaaattctggaagtacccaatttg
atcgatattcaaaccagatcgtatgaaacatttcttcaggaggatgtagctccagaaaat
cgtaagaatttcggcttgcagggtgcgtttaaaagcgtattccccatttcggatttcagc
ggaaagtgttccttggaattcgtgagttacaagataggggctgttcgttatgacgtgaac
gagtgcattcagaaggggatgacctatgcggctcccttgaagattgtggttcgactcgtt
gtttttgacacggatcgcttgtccgatcagaaaaacatccgggacatcaaagagcaggag
atttattttggtgaaattcctctgatgactgaaaagggaactttcattgtcaatggaacg
gaacgtgttattgtcagccaactacaccgatcgccaggcatattttttgaccatgataag
ggaaaaacacttacaagtggaaagttaatctattcagccagaatcattcccatccggggg
tcctggcttgatctggaatttgattccaaggatcttctctatgtccgtatagaccgtcgc
aggaagatgcccgttactattctcctcaaggcaatgggctactcaacggaagatttattg
aattatttctatgatgtggaacatatcttctgtgaaggcgaaaatttttacgctgctgtc
gatgagtctcttgtagggcataaactttatgacgacataagagacatcaacacgggagaa
attctttttaagaaagggcgccgcatcaataaggtgattcttaaaagaatcagggaacag
cgtgtcgagcgaatcaagatggatgtcgaggagcttccaggaagaatactggcaaccgat
attctggatccggaaacaggggaggttctcttccactgcaatgaggcgttgagtgccgca
ggaatcgatgtggtgcgggaaaaaggaataagagaactgagcgtcatcaatctcggtgag
gacctgtccaatgtttcaataagagacactctattgattgatcggatggaaactccggga
gatgcgatcatcgaaatctaccgtcgtcttagaccaagcaatcctcctacacccgatacg
gctcagaagttttttaacagcctcttttttgagaatgaaagttacgatctttcgactgtc
ggtcgggcgaagatgaactataagctccgcctcgatgtttccacggatgtcaccgtcttg
agaaaagaagacatcatggccgcggtcaaatatctcatcgaccttaaaaacggcgtcccg
gagtgcagcgtggatgacatcgatcatctcgggaaccggagagtgcgttccgtcggggaa
ttgattgaaaaccagtatcggatcggtttggttcgaatggaacgcgccataaaggaaaaa
atgagtcttcaggatatcgagacgatgatgcctcatgacctggtgaatgtaaagcccgta
tccgccgtggtcagtgaattcttcggcagcagtcagctttcgcagtttatggatcagacg
aatccattatccgagattacccataagagacggttgtccgccctggggcctggcggattg
acaagagagagagccggttttgaagttcgcgatgttcatccaacccattatgggcggatc
tgtccagtggaaacgccggaagggccgaacatcgggttgattgtttcgctcagtacctat
gcgcgggttaatgaattcggtttcatcgagaccccttaccggatagtaaaagaagggcgg
gttctgccggaagttaaattcctgaccgcaatcgaggaagaaaaccaggttatagcacct
gctgaccaacctgtgaaccacgatgggagcttcaagggtgatttaatctctgcaaggaag
gggggggattttgtcaatgttgttccatcggaggtcaacatggtggatgtatcgcctaac
cagttggtcagtgttgccgcaacgctgatcccctttctggagcatgacgatgcaaaccgt
gccctgatggggtcgaacatgcagcggcaagccgtgcctctgatgaggccggagattcct
cttgtgggtaccggtatggagcggattgtagcccgggattcaggtgctgttgtggtggca
aagagatcgggaattgttgagagtgtcgatgcatcgagaattgtcatcaagtgtgaaagt
gccgaaaaaacagatcgagataccggtgttgatatttatacgctgatcaaataccagcga
tcgaatcaggatacctgcttcaaccagaaggccatcgtcaacaagggccagcgtgtcagg
aaaggggacatcatcgccgatggtcccgccactgataacggcgagctggccctcggacac
aacgtcatggtggccttcatgtcctggggcggatacaactacgaagattccattctcgtc
agtgaaaggatagtcaaggaagatatctacacttccattcatatcgaagaatttgagacc
atggcccgggacaccaaactgggtaaagaagatataactcgcgatatccctaatgtcgga
gaagaagcgctccgcaatctggatgatagcggaatcgttcgaatgggggtttccgtcaaa
tccggtgatattctggtgggtaaaattacacccaaaggggaaacgcagctttcatctgaa
gaaaagcttctccgggcgatttttggcgaaaaggccagcgacgtaagagatacctcgtta
cgtgtcccgccgggcgtagaggggactgtcatcgatgccaaggtatttaccagaaaaggt
gcagagaaagatcatcgctcacagtatatcgaagatgaagcaatcgccatgcttcagaaa
gacagagaagatgaaatccggattattactgaagcagtgaagaaggaagtcggtacattg
ctgcagggcaagcagtccggtgcgaagatcgttgatccgaaaagaaagaaaatttacctc
aaaaagggtgatattataacacccgagatattaagtgaaattccactccatttatggaag
gaaatcactgtggcagatgacgaagaaacagagcgggctgtaggtcagatgatggccaat
ctttacgataagatcgaggtggtggaagcctatttcaatgagaagacggaaaagctgaag
gccagtgatgagctgccgcccggtgtcatcaagatggtcaaagtctatattgccatcaaa
aggaaactgcaggccggagacaagatggcgggaagacatggaaacaagggcgtcctctca
agaatcttgcctgaagaggacatgccctatttcaaggacggcaggcccgtggacatcgta
ctgaatccccttggagttccctcgcgcatgaatgtgggacagatccttgaaactcatctc
ggttgggctgcgaaaggtcttggggaaaaactcaatgacatgctggattcctatcagaaa
ggaaatcagttgagggatgagttgaaaggcatctaccagtcaagagaattcgaaaaattt
gtagacggggcaaccgaagaagaaacttatcagtttgtgcgaaagctcagaaggggcatc
gccgtttcatcgcccgtgtttgacggagccactgaatctgacatcagaaatatgctgaag
ctggcaaatttaccttcaactggacaggctatactctatgatggtcgtacgggtgagccg
ttcgatcaggaaatcaccgtgggcatgatttacatgctgaaacttcatcatcttgtggat
aacaagattcatgcacgatctataggaccatactcactggtaacccagcagcctcttgga
ggaaaggctcagtttggagggcagcgacttggagagatggaagtctgggcgatggaggct
tacggcgcagcgtattcactgcaggaattcttaaccgtcaaatcagatgatgtagccggc
cgaacgaggatttatgaagcgatcgtcaaaggcgagaatacatcggagccaggtctgccg
gagtcgttcaatgtgctggtaaaagaattgcaaagtctttgccttgatgtggagttgatt
gaggaagaataa |
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