KEGG   Syntrophus aciditrophicus: SYN_00163
Entry
SYN_00163         CDS       T00346                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
sat  Syntrophus aciditrophicus
Pathway
sat03030  DNA replication
sat03430  Mismatch repair
sat03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SYN_00163
   03430 Mismatch repair
    SYN_00163
   03440 Homologous recombination
    SYN_00163
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sat03032]
    SYN_00163
   03400 DNA repair and recombination proteins [BR:sat03400]
    SYN_00163
Enzymes [BR:sat01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SYN_00163
DNA replication proteins [BR:sat03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SYN_00163
DNA repair and recombination proteins [BR:sat03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SYN_00163
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNAX_ATPase_lid AAA RuvB_N AAA_5 AAA_22 TIP49 AAA_16 AAA_30 AAA_2 DUF3646 Mg_chelatase AAA_19 PIF1 AAA_7 AAA_14 AAA_18 nSTAND3 Rad17 DNA_pol3_delta_C TsaE NACHT Sigma54_activat DUF815 RNA_helicase
Other DBs
NCBI-ProteinID: ABC75957
UniProt: Q2LYB8
LinkDB
Position
80085..81851
AA seq 588 aa
MDYLVLARKWRPQVFEDVVGQQHVVQTLKNAIRQERIAHAFLFSGPRGVGKTSIARILAK
AINCEQGPAGTPCNVCTNCREITEGISMDVREIDGASNRGIDEIRELRERIRFLPVSCRY
KVYIIDEVHMLTREAFNALLKTLEEPPPHVVFIFATTETHKVPATILSRCQCFEFRRLSL
RQIAEQLRKIAETEKIRISDAGLAWIAEAGDGSMRDSESIFDQVISYAGTAIEDEAVEEL
LGRTDRRFLFQLSEAVLRRDAGQCLRIVEEGYYAGLDMTYFYTLLLHHFRNLLLVKIVGP
QQELLDLPGNDLSGIEAQVAEVSRETLQQLLDILLAEEESARRSHNPRLHLEAIVCRMAG
LPPALPIEEILSRMEDLETRLASSAPCLSETVPGAASFSPSKPGNSTTVRERPLTLPIVR
TEDRSVREPMAELQGAVRDPAHAGGDVWADFKAHVKKHSILLASKIEQGECLGCENGHLR
IGFRKGSVFFEDLNEPEQKSRLSELAGSFFKTAVTVDIEPVETESDGRGSGGRLSEAMAR
KNQAEELRREALNHPLLQKVLSVFEGAEVQEIKVLPPQRPSTDVKSEG
NT seq 1767 nt   +upstreamnt  +downstreamnt
atggactaccttgttttagcccgcaaatggaggcctcaggtctttgaggacgtcgtcggc
cagcagcatgtcgtccagaccctgaagaatgccatccgtcaggagcgcattgcccacgcc
tttctgttcagtgggccgcgcggtgtcggcaagacctccattgcccgcattctggccaag
gccatcaattgtgaacaggggcctgccgggacaccgtgcaatgtctgtacaaactgccgt
gaaatcacggaaggcatttccatggatgtccgggaaatcgatggcgcctccaatcggggt
atcgacgaaattcgggagctccgcgaacggatccgtttcctgcccgtttcctgccgttat
aaggtctatatcatcgatgaagtgcacatgctgactcgggaagccttcaacgctctgctg
aagaccctcgaggaaccccctccccatgtcgttttcatttttgccacaacagagacccat
aaagtgccggcaaccatcctttcccgctgtcagtgctttgagttccgccgcctttccctg
cgtcagattgcagagcagctgcggaagatcgccgagacggaaaagatccggatcagcgat
gccggccttgcctggattgccgaagcgggggacggcagcatgcgggactccgagagcatc
tttgatcaagtgatttcctatgccggaacggcgatcgaagacgaggccgttgaggagctg
ctcggccggaccgaccgtcgctttctcttccagctttccgaggcggtcctgcgccgcgat
gccggacaatgtctccggattgtggaggaggggtattacgccggcctggacatgacgtat
ttttatacgcttcttctccaccatttccgtaatcttctcctggtgaagatcgtcgggccg
cagcaggagctcctggatctgcccggcaacgacctgtccggcatcgaggcgcaggtggcg
gaggtctcgcgggagactctgcagcagcttctggatatcctgctggcggaagaggaaagc
gcgcgacggagccacaacccccggcttcacttggaagcgatcgtctgccgcatggccggt
ctgccgccagctcttcccatcgaagagattctctcccgcatggaggacctggaaacccgg
ctggcgtcttccgcgccttgcctttcggaaacggttcccggggccgcctccttttcgcct
tccaaaccgggaaattcaacgacagtgagagagcgtccgttgacactgccaatcgtccgg
acagaggaccggagcgtaagggaaccgatggcggaattgcagggggcggtcagggatccg
gcgcatgccgggggggatgtctgggcggatttcaaagcccatgtgaagaagcattcgatc
ctgctggcctccaagatcgagcagggcgaatgtctcggctgtgaaaacggccatctgcgc
atcgggtttcgcaaggggagcgttttttttgaggacctcaacgaaccggagcagaagagc
cggctgagcgagcttgccggatcctttttcaaaaccgccgtgacggtggacatcgagccc
gtggagacggaatccgacggtcggggctccggggggagattgtcggaggccatggcccgg
aaaaatcaggcggaagagctccgtcgggaagccctgaatcatccccttctgcagaaagtc
ttgagcgtctttgaaggagcggaggttcaggagattaaagtcctgccccctcagaggcca
tcgaccgatgtgaagtctgaaggataa

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