Syntrophus aciditrophicus: SYN_00163
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Entry
SYN_00163 CDS
T00346
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sat
Syntrophus aciditrophicus
Pathway
sat03030
DNA replication
sat03430
Mismatch repair
sat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SYN_00163
03430 Mismatch repair
SYN_00163
03440 Homologous recombination
SYN_00163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sat03032
]
SYN_00163
03400 DNA repair and recombination proteins [BR:
sat03400
]
SYN_00163
Enzymes [BR:
sat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SYN_00163
DNA replication proteins [BR:
sat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SYN_00163
DNA repair and recombination proteins [BR:
sat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SYN_00163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_5
AAA_22
TIP49
AAA_16
AAA_30
AAA_2
DUF3646
Mg_chelatase
AAA_19
PIF1
AAA_7
AAA_14
AAA_18
nSTAND3
Rad17
DNA_pol3_delta_C
TsaE
NACHT
Sigma54_activat
DUF815
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
ABC75957
UniProt:
Q2LYB8
LinkDB
All DBs
Position
80085..81851
Genome browser
AA seq
588 aa
AA seq
DB search
MDYLVLARKWRPQVFEDVVGQQHVVQTLKNAIRQERIAHAFLFSGPRGVGKTSIARILAK
AINCEQGPAGTPCNVCTNCREITEGISMDVREIDGASNRGIDEIRELRERIRFLPVSCRY
KVYIIDEVHMLTREAFNALLKTLEEPPPHVVFIFATTETHKVPATILSRCQCFEFRRLSL
RQIAEQLRKIAETEKIRISDAGLAWIAEAGDGSMRDSESIFDQVISYAGTAIEDEAVEEL
LGRTDRRFLFQLSEAVLRRDAGQCLRIVEEGYYAGLDMTYFYTLLLHHFRNLLLVKIVGP
QQELLDLPGNDLSGIEAQVAEVSRETLQQLLDILLAEEESARRSHNPRLHLEAIVCRMAG
LPPALPIEEILSRMEDLETRLASSAPCLSETVPGAASFSPSKPGNSTTVRERPLTLPIVR
TEDRSVREPMAELQGAVRDPAHAGGDVWADFKAHVKKHSILLASKIEQGECLGCENGHLR
IGFRKGSVFFEDLNEPEQKSRLSELAGSFFKTAVTVDIEPVETESDGRGSGGRLSEAMAR
KNQAEELRREALNHPLLQKVLSVFEGAEVQEIKVLPPQRPSTDVKSEG
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggactaccttgttttagcccgcaaatggaggcctcaggtctttgaggacgtcgtcggc
cagcagcatgtcgtccagaccctgaagaatgccatccgtcaggagcgcattgcccacgcc
tttctgttcagtgggccgcgcggtgtcggcaagacctccattgcccgcattctggccaag
gccatcaattgtgaacaggggcctgccgggacaccgtgcaatgtctgtacaaactgccgt
gaaatcacggaaggcatttccatggatgtccgggaaatcgatggcgcctccaatcggggt
atcgacgaaattcgggagctccgcgaacggatccgtttcctgcccgtttcctgccgttat
aaggtctatatcatcgatgaagtgcacatgctgactcgggaagccttcaacgctctgctg
aagaccctcgaggaaccccctccccatgtcgttttcatttttgccacaacagagacccat
aaagtgccggcaaccatcctttcccgctgtcagtgctttgagttccgccgcctttccctg
cgtcagattgcagagcagctgcggaagatcgccgagacggaaaagatccggatcagcgat
gccggccttgcctggattgccgaagcgggggacggcagcatgcgggactccgagagcatc
tttgatcaagtgatttcctatgccggaacggcgatcgaagacgaggccgttgaggagctg
ctcggccggaccgaccgtcgctttctcttccagctttccgaggcggtcctgcgccgcgat
gccggacaatgtctccggattgtggaggaggggtattacgccggcctggacatgacgtat
ttttatacgcttcttctccaccatttccgtaatcttctcctggtgaagatcgtcgggccg
cagcaggagctcctggatctgcccggcaacgacctgtccggcatcgaggcgcaggtggcg
gaggtctcgcgggagactctgcagcagcttctggatatcctgctggcggaagaggaaagc
gcgcgacggagccacaacccccggcttcacttggaagcgatcgtctgccgcatggccggt
ctgccgccagctcttcccatcgaagagattctctcccgcatggaggacctggaaacccgg
ctggcgtcttccgcgccttgcctttcggaaacggttcccggggccgcctccttttcgcct
tccaaaccgggaaattcaacgacagtgagagagcgtccgttgacactgccaatcgtccgg
acagaggaccggagcgtaagggaaccgatggcggaattgcagggggcggtcagggatccg
gcgcatgccgggggggatgtctgggcggatttcaaagcccatgtgaagaagcattcgatc
ctgctggcctccaagatcgagcagggcgaatgtctcggctgtgaaaacggccatctgcgc
atcgggtttcgcaaggggagcgttttttttgaggacctcaacgaaccggagcagaagagc
cggctgagcgagcttgccggatcctttttcaaaaccgccgtgacggtggacatcgagccc
gtggagacggaatccgacggtcggggctccggggggagattgtcggaggccatggcccgg
aaaaatcaggcggaagagctccgtcgggaagccctgaatcatccccttctgcagaaagtc
ttgagcgtctttgaaggagcggaggttcaggagattaaagtcctgccccctcagaggcca
tcgaccgatgtgaagtctgaaggataa
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