Syntrophus aciditrophicus: SYN_00402
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Entry
SYN_00402 CDS
T00346
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sat
Syntrophus aciditrophicus
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sat03400
]
SYN_00402
Enzymes [BR:
sat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SYN_00402
DNA repair and recombination proteins [BR:
sat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SYN_00402
Prokaryotic type
SYN_00402
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABC76875
UniProt:
Q2LS17
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All DBs
Position
1030703..1032085
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AA seq
460 aa
AA seq
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MIQKERVKSLNKAELKKGKYVLYWMQASQRETCNHALEYAIRKANALCQPVVVFFGIVDD
FPEANERHYFFMLEGLCDAKRTLEKRGIQLVIQHCSPELGVVMMSRDASLVVVDRGYLRI
QKAWRNVAAASMDCPLIQVESDVVVPIEETSSKEEYSAATIRKKIHQKLNQYLISLEETK
PMADSLSLDFESFPIDDVERAILRLDIDRSVKCVSFFRGGFEEGRKHLDVFIDQKLEHYA
EHRNDPTLDCLSLMSPYLHFGQISPLYIALRILNSGRTSSEAYLEELIVRRELGINFVFY
NTHYDTFECLPGWAKKSLRTHEKDQRPYHYSRKELEDGKTHDPYWNAAQKEMVLKGKMHG
YMRMYWGKKIIEWCETPEEAFHTAIYLNNKYELDGREPNGFMGVAWCFGKHDRPWRERNI
FGNVRYMNDRGLKRKFDADGYVKLSAQWEDQGALIPNQLE
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaaggaaagagttaaatcgctgaataaggcagagttgaaaaaaggaaagtat
gtcctgtattggatgcaggcctctcagagagagacatgtaatcacgctctggaatacgca
atccgaaaagccaatgcgctttgccaacctgtagttgtttttttcggtattgtcgacgat
ttcccagaagctaatgaacggcactacttttttatgctggagggcctttgtgatgcgaag
cgcacccttgagaaaagaggtattcaacttgtaattcaacactgctcaccggaacttgga
gttgtaatgatgagccgggatgcttctctggtagttgtggacagagggtatcttcgaata
caaaaagcttggagaaacgtcgcggctgcttccatggattgtcctctaattcaggttgaa
agtgatgtggtagttcctattgaagaaacttcgtccaaggaggaatattctgcagcaaca
atccgaaaaaaaatccaccaaaaattgaatcagtacctgatttctctggaagaaaccaaa
ccaatggccgattctctttctctcgattttgaatcttttcccatcgatgatgtggaaaga
gccatcttgcgcctcgatattgaccggagcgttaaatgtgtcagcttttttcgaggaggc
tttgaggagggcaggaagcatcttgatgtgttcattgatcagaaactggagcattatgct
gaacacagaaatgacccaactctggactgtctctccctcatgagcccctatcttcatttc
ggacagatatcacctctgtacatcgcgctgaggatcttgaactctggcagaaccagcagt
gaggcctatcttgaggaactcattgtcagacgagagttgggcatcaacttcgtattctac
aatacacattatgatacatttgaatgcctcccaggctgggcgaaaaaaagtctgaggact
catgagaaggaccaacggccctatcattactctcgcaaggaattagaggatgggaaaaca
catgatccgtattggaacgccgcgcagaaagagatggtgttgaagggaaagatgcacggt
tatatgagaatgtattggggaaaaaaaattatcgagtggtgtgagactcctgaagaagct
ttccataccgcgatatatctcaacaacaagtacgagttggatggaagggagcccaatggt
tttatgggcgttgcatggtgtttcgggaagcatgaccgcccctggagggaacgaaacatt
ttcggtaacgtcagatacatgaatgacagggggctaaagagaaaatttgatgccgacggg
tacgtgaaactaagcgcgcaatgggaagaccaaggtgctttaattcccaatcagttagaa
taa
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