Syntrophus aciditrophicus: SYN_00941
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Entry
SYN_00941 CDS
T00346
Name
(GenBank) ATP-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
sat
Syntrophus aciditrophicus
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sat03019
]
SYN_00941
Messenger RNA biogenesis [BR:
sat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SYN_00941
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
AAA_29
AAA_16
AAA_30
AAA_33
AAA_22
AAA_28
ABC_tran
nSTAND3
Rad17
AAA_21
CPT
HTH_IclR
AAA_23
FtsK_SpoIIIE
CoaE
APS_kinase
T2SSE
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
ABC77096
UniProt:
Q2LSN7
LinkDB
All DBs
Position
1234225..1235148
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AA seq
307 aa
AA seq
DB search
MPGGGNGILYSNLAAVKEMKMNNLRVVIITGLSGSGKSTALRALEDIGFYCVDNMPVVLL
PQFLEIQSDKSKDISQVAMVMDLREKSFIETYKGIFEQIKARGYKIEIVFLYATDDALLH
RFSETRRVHPLSSVSIMEGIRLEREQLRALEEMADKVIDTTSCNVHQLKDIVQRHFLPSS
TARRLFIHLISFGYRYGLPADADLVLDVRFLPNPYWVESLKSFNGHHQDVRRYVLSAEAS
SIFLQKLFDLMEFLIPLYEKEGKPRITIAVGCTGGKHRSVVMANELWSYFSGRDYPVNVN
HRDVGKS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcccggtggcggaaatggaatcctgtattcgaaccttgcagcggttaaggagatgaag
atgaataaccttcgcgtagtcattattaccggtctttccggttcagggaaaagcacggcg
ttaagagcactggaggatatcggtttttattgcgtggacaatatgcccgttgtcctgctg
ccgcagtttctggaaatccagtccgacaaatcaaaggatatctctcaagtggccatggtg
atggacttgagggaaaaatcatttatcgaaacttataagggcatcttcgaacagatcaaa
gcccggggttataagatcgagatcgtttttctctatgccaccgacgacgctctgctgcat
cgcttcagcgaaacgagaagggttcaccctttgtcgagtgtttcgatcatggaagggatt
cgtctggagcgcgagcagcttcgcgccctggaggaaatggccgataaggtgattgatacg
acttcctgcaatgtccatcagttaaaggatatcgtccagcgtcattttctgccttcctcc
acggccagacggttgtttattcatctgatctctttcggctatcgttacggtctcccggcc
gatgccgatttggttctggatgttcgttttcttcccaatccctattgggttgaaagctta
aaatccttcaatggtcaccatcaggatgttcggcggtatgttctgagtgctgaagcgagt
tccatctttcttcagaagctgttcgacctgatggaatttttgattcctctttatgaaaag
gaaggaaaaccacgaataaccattgccgtgggatgcacgggggggaagcatcgctccgtt
gtcatggcgaatgaattgtggtcctacttttccggccgggattatccggtaaacgtgaac
caccgcgacgttggtaaaagctga
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