Syntrophus aciditrophicus: SYN_00982
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Entry
SYN_00982 CDS
T00346
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
sat
Syntrophus aciditrophicus
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sat03400
]
SYN_00982
DNA repair and recombination proteins [BR:
sat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SYN_00982
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
Lon_C
AAA_22
DnaB_C
ChlI
AAA_16
nSTAND3
NTPase_1
SLFN-g3_helicase
AAA_30
AAA
AAA_14
AAA_5
AAA_24
GvpD_P-loop
ATPase_2
NACHT
CbiA
RecA
NPHP3_N
DUF7125
MeaB
T2SSE
Zeta_toxin
ATP-synt_ab
Fer4_NifH
DEAD
ABC_tran
HepII_C
KdpD
DUF7129
Zn_ribbon_RPB9
AAA_18
MCM
DAP3
AAA_19
HypA
KTI12
RUBY_RBDX
zf-RING_10
DZR
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABC77053
UniProt:
Q2LSJ5
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Position
1198432..1200048
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AA seq
538 aa
AA seq
DB search
MGAPTGASFKASRFQSGLLLQGPELKFGLCIKTFPLFFCKIRAHYINIVFNTQEICDDDF
YVLMLTKALIYLMFRPFLLKTERWILKKNRTAFFCRNCGYESPKWLGKCPACNEWNAFIE
EEATTIGADSGYGTLQMNENPLSIDTIEANEKERVKTDILEMDRVLGGGIVEGSAVLVGG
DPGIGKSTLLLQMLQKLAEKGRNVLYVSGEESARQIKLRGMRIGAESKNLLVLVETSLEN
ILQHLKTLKPDVAVIDSIQTVFSTSMGSAPGSVGQVRETAGRLIHFAKKTGVSIFLVGHV
TKEGSIAGPKVLEHMVDTVLYFEGDSGHAYRIIRGMKNRFGPSNEIGVFEMRDSGLVEVL
NPSTFFLSERPEAASGSVVVPSMEGTRPILVEIQSLVSPSPLGTPRRTSIGVDSNRVSLL
VAVLDRVCGLHLSSNDIFLNVAGGIRVDEPAADLGIVAAMASSFLERPIDPGTVIFGEVG
LTGEVRGISQMIVRIREAARMGFNRCLLPRTLSQEITELSGIELCRVGSLGELLENLF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
gtgggagcgccgacaggggcatccttcaaggcttcaaggttccaatcgggtcttttgctg
caggggcctgaactgaaatttggattatgcataaaaacctttcctctcttcttttgtaaa
attcgcgcgcactatatcaatattgttttcaatactcaagaaatttgcgacgatgatttt
tatgttttgatgttgactaaggcgttaatctaccttatgtttcgaccattcttgttgaag
acggagagatggattttgaaaaagaacaggacagcctttttctgtcggaactgtggttat
gaatcgccgaagtggctgggtaaatgtcccgcctgcaacgaatggaatgccttcatcgaa
gaagaggcgacaacgatcggcgcagattccggatacggaaccctgcagatgaatgagaac
cccttgtccattgacaccatcgaagcgaatgaaaaagaacgcgtcaaaacggatatcctg
gaaatggatcgagttcttggcggaggaattgtggaagggtccgccgtactggtcggtggt
gatcctggcatcggaaagtcgaccctgctcctgcagatgctgcagaaactggcggaaaaa
gggcggaatgtcctttatgtttccggagaggagtccgcgaggcagatcaagctgaggggt
atgagaatcggggctgaatcgaaaaatctactcgttctggtggaaacgtcgttagaaaat
atactccaacacctaaaaactcttaaaccggacgtggccgtcatcgattccatccagacg
gtgttttccaccagtatggggtccgcaccgggaagtgtgggacaggtcagggagacggcg
ggtcgactgatccattttgcaaaaaaaaccggggtgtccatttttctcgtcggtcatgta
accaaagaaggttccattgccggtccgaaagtacttgagcatatggtggacaccgttctt
tatttcgaaggggattccgggcatgcctaccggatcatccgcggcatgaaaaaccgattc
gggccgagcaatgaaatcggggtctttgaaatgagagacagcggcctggtggaagttctc
aatccttcgacgtttttcctttccgaacgtccggaagccgcctcaggatctgtcgtcgtt
ccaagcatggaaggcacccgcccgattcttgtggagattcagtcgctggtcagtccttct
ccgctggggacgccgagaaggaccagcataggcgttgattccaaccgggtatccctgctg
gttgccgttcttgatcgcgtctgcgggctgcatctgagttcaaatgatatctttctgaat
gtggccggaggaatccgggtggatgagccggcggcagatctcgggattgtggcggccatg
gcctccagttttctggagaggccgatcgatccgggaacggttatcttcggagaagttggg
ttgacgggtgaagttcgagggatttcccagatgatcgtacggattcgggaggcggcgcgt
atgggatttaatcgatgtcttcttccacgcaccctttctcaggagattaccgaactgtcc
gggatagagctctgccgtgtcgggagcctgggagagttgctggagaatctgttttaa
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