KEGG   Syntrophus aciditrophicus: SYN_00996
Entry
SYN_00996         CDS       T00346                                 
Name
(GenBank) signal recognition particle GTPase
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
sat  Syntrophus aciditrophicus
Pathway
sat02024  Quorum sensing
sat03060  Protein export
sat03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    SYN_00996
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SYN_00996
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SYN_00996
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sat02044]
    SYN_00996
Enzymes [BR:sat01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     SYN_00996
Secretion system [BR:sat02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   SYN_00996
  Eukaryotic Sec-SRP protein
   SYN_00996
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA AAA_24 VirC1 ParA AAA_33 AAA_31 AAA_30 AAA_18 SRPRB UBX Zeta_toxin AAA APS_kinase AAA_25 CENP-H AAA_19 MobB nSTAND3 NACHT YqeC AAA_5 AAA_16 6PF2K ParBc AAA_28 Pox_A3L AAA_17
Other DBs
NCBI-ProteinID: ABC78209
UniProt: Q2LVU8
LinkDB
Position
complement(2378310..2379644)
AA seq 444 aa
MFENLAEKLEGVFKRLKGRGRLDEENIKEALKEIRMALLEADVNFKVVKDFIEEVRSRAV
GQEVLESITPGQQIVKIVHDRLVELLGGTSSQLRFGSRFPAPIMLVGLQGCGKTTTAVKL
AKVLAKGGKRAGLVSADVYRPAAMEQLRVMAQKIGAPAFNADSSQDPVKICVQAVEEAKR
NGYEVLILDTAGRLAIDTQMMEELKQIKNAVNPSEILFVADAMTGQDAVNVAAKFNELLG
IDGVIMTKMDGDARGGAALSLKAVMGKPIKYVGIGEKIDALEVFHPERMASRILGMGDIL
SLVEKAQTVVDEKQARELEQRIRKNEFTLEDFKTQLLQIKKMGSLQDIIGMIPGLNKLKS
LKQATPDEKELVRIVAIIDSMTKKERLNYQLIDGQRRKRIALGSGTTVQDVNRLLKNYAD
VKKMMKRMTSKGGIKALRRGNFPF
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgtttgagaatttagcggagaaactcgaaggggttttcaaaagactgaaaggtcgggga
cgcctggatgaagagaacatcaaggaagccctcaaggaaatccgcatggctctgctggag
gcggatgtcaacttcaaagtcgtgaaagactttatcgaggaagtgcgttcccgggccgta
ggacaggaggttctggaaagcatcacccctggccagcagatcgtaaagatcgtgcatgac
cgacttgtagaactgctgggcggtacgagcagtcagttgagattcgggagccggttcccc
gctccgatcatgcttgtgggtcttcaggggtgcggtaaaaccacgacagccgtaaaactg
gccaaggtcttggcaaaaggcggtaagcgggcaggacttgtttccgctgacgtataccgt
cctgcagccatggaacagttgagggtgatggcgcagaagatcggcgccccggcttttaac
gcggacagcagtcaggatcccgtaaagatatgcgtgcaagccgttgaagaggcaaagagg
aacggctatgaggtgctgatccttgataccgccggtcgtctggccatcgatacccagatg
atggaggaattgaagcagattaaaaacgccgttaatccttccgagatcctctttgtcgcc
gatgccatgaccggtcaggacgcagtcaatgttgccgcgaagttcaacgaactgctgggc
atcgacggcgtcatcatgactaagatggatggtgatgcccgcggcggcgcggcactttcg
ctaaaagcggtcatgggcaaacccatcaagtatgtgggtatcggggaaaaaatcgacgct
ctggaagtttttcatccggaacgcatggcttcccgcatcctgggaatgggcgacatcctc
agccttgtcgagaaagctcagacggtcgtcgatgagaaacaggcccgtgagctggagcag
agaatacggaagaatgaatttaccctggaggattttaagacgcagttgctgcagatcaaa
aaaatgggttcactccaggacatcatcgggatgattcccggtttgaacaaactgaaatct
ttgaaacaggctacgccggatgagaaggaactggtcaggatcgttgccatcattgattcc
atgacgaaaaaggaacgcctcaattatcagttgattgacgggcagaggagaaaacggatc
gctttgggaagtggaacgactgtgcaggatgtcaatcggctgctgaaaaattacgcggat
gtaaaaaagatgatgaagaggatgacctccaagggaggcatcaaagcgttacgtcgaggc
aatttccccttttaa

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