Syntrophus aciditrophicus: SYN_01021
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Entry
SYN_01021 CDS
T00346
Name
(GenBank) erfK/ybiS/ycfS/ynhG family protein
KO
K19236
L,D-transpeptidase YcfS
Organism
sat
Syntrophus aciditrophicus
Pathway
sat01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SYN_01021
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sat01002
]
SYN_01021
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sat01011
]
SYN_01021
Peptidases and inhibitors [BR:
sat01002
]
Cysteine peptidases
Family C82
SYN_01021
Peptidoglycan biosynthesis and degradation proteins [BR:
sat01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SYN_01021
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Motif
Other DBs
NCBI-ProteinID:
ABC77010
UniProt:
Q2LSF3
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All DBs
Position
1159026..1159682
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AA seq
218 aa
AA seq
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MKGNEKDEMKREDPGKQRAKRPAGLSGPSRRFFLSGLLIVLLTLCATVDAGRRSHAGMLQ
GQRTVGIDRRHAIEISVSRKVLILYEKTAGNKLLPRREYKVGTAVLGLDVYPLGKGQVTA
IDFYPSWYPTPYSREVFRKRGIELPPAVPPGHPLNYMGAAKISLSHRTRKGAIYRIHGNN
NPGRVGRRVTGGCFVMYNDDVLELARTISVGTEVNILP
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaagggaaatgaaaaggatgagatgaaaagggaagatcctggcaaacagcgtgcgaaa
cgaccagccggtctgtccggtcccagccgacggttttttctctccggattgctgattgtt
ttactgaccctgtgcgcgacagtggatgcaggcaggcgatcccatgcgggaatgcttcag
gggcagcgcaccgtgggaattgacagacgccacgcaattgaaatcagcgtcagccggaaa
gttttgattctttatgaaaagactgcgggtaataaactgcttccccgacgggaatacaag
gttgggaccgctgttctggggctcgatgtctatcccctcggcaaaggtcaggtgacggcc
attgacttttatccctcgtggtatccaacgccgtactcccgggaggtttttcgaaagagg
ggaattgagctcccgccagcggtgcctcccggccaccctctgaactacatgggcgccgca
aagatttctctttcccacaggaccaggaaaggggccatctaccgaattcacggcaacaac
aatcccggacgcgtgggccggcgggtaacgggtgggtgcttcgtcatgtataacgatgat
gtgcttgaactggccaggaccatttccgtgggaacggaggtgaatattcttccatga
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