Syntrophus aciditrophicus: SYN_01090
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Entry
SYN_01090 CDS
T00346
Name
(GenBank) transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
sat
Syntrophus aciditrophicus
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sat03000
]
SYN_01090
Transcription factors [BR:
sat03000
]
Prokaryotic type
Helix-turn-helix
Other families
SYN_01090
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GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_4
PAS
PAS_9
PAS_3
AAA
HTH_8
AAA_2
AAA_5
PAS_8
Mg_chelatase
ATPase
TPD52
AAA_7
Vac_Fusion
AAA_22
AAA_3
TsaE
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ABC77724
UniProt:
Q2LUG3
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Position
complement(1917267..1918874)
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AA seq
535 aa
AA seq
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MQKEAEIKGTGTQGQSPLSALEPFSMNRKPTYEELEKRVRVLEKESLKYTQTENRLNETL
QRLNFHIDNAPLAVVEFNNRFQITYWSNQAEKIFGWNAEEVMGKRIDQLKWVYKDDMHHV
AELSAEMLASRRTSNIHINRNYRKDGSVIICEWYNSVLLNSKGKLISIQSMARDVTEQHR
LEAELAKAFDEIKRLKDQLEAENIYLRDEIKLKEGFGEIIGASDVIKSTIHKIRQVAPSK
TTVLFAGETGTGKGIFARFLHRESDRRDRPFVNVNCASLPANLIESELFGREKGAYTGST
ARQIGRFELANNGTIFLDEIGEVPMELQAKLLKVIEEGEFERIGSPHPIKVDVRIIAATN
RDLQEEIKKGRFRQDLYFRLNIFPINIPPLRDRKGDIPLLVKAFVAKFSKSHNRDIKRIP
AKIMESLKNYAWPGNVRELINVMERAVIVSEGSELQLAEKIDAIPLDSSIRGDESFSTGS
GETLADAEREHILKALQQTGWRIEGPRGAAQILDLQPNTLRARMKKLGIKRPGTP
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaggaagcagaaatcaaggggacaggcacccagggtcaaagcccgctttctgca
ctggagccattcagcatgaacagaaaacccacttatgaagaactggaaaaaagagtcaga
gttctagagaaagaatcattaaaatacacacagactgagaacagactgaatgaaaccttg
caacggcttaatttccacatcgacaatgcgcctctggcggttgtggaatttaacaaccgc
ttccagattacctactggtcgaatcaggccgagaagattttcggctggaatgccgaggag
gtgatgggcaaaaggatcgaccagttgaaatgggtttacaaagacgatatgcaccatgtc
gccgaattaagcgccgagatgctcgcatcgcgccggaccagcaacatccacataaaccgg
aactatcgcaaggacggctcagtcatcatttgtgagtggtacaactccgtgctgttaaac
tcgaaggggaagctcatatcaatccaatccatggctcgggatgttacagagcaacatcgt
ctggaggctgagttagcgaaagcctttgatgagattaagagactgaaggaccagctggaa
gccgagaatatctatctgcgcgatgaaatcaagttaaaagagggctttggcgaaatcatc
ggcgccagcgatgtaataaaatccaccattcacaagatccggcaggttgcccccagcaag
acgacggtgctcttcgccggcgagacgggaaccggaaaggggatcttcgcccgctttctc
caccgggaaagcgaccgccgagacaggccctttgtgaatgttaactgcgccagccttccc
gcaaacctcattgagagcgaacttttcggcagagaaaagggcgcgtataccggctccacg
gcacggcagatcggccgcttcgagcttgccaataatggcaccatctttcttgacgagatt
ggtgaggtgccgatggaactgcaggctaagctcctgaaggtcatagaggagggagagttc
gagcgcatcggcagccctcatccgataaaggttgatgtccggatcatcgcggccaccaac
cgcgatctccaggaagagataaagaaaggccgttttcgacaggatctttatttccgactc
aatatttttcccatcaatatccctcccttgagagacaggaagggagacatcccgcttctc
gtgaaggccttcgtggcaaaattcagcaagagtcacaacagagatattaaaaggattccc
gcaaagatcatggaatctctgaaaaactatgcctggccgggaaatgtgcgcgagctgatt
aatgttatggagcgggccgtaatagtcagtgaaggttctgaacttcagcttgcagaaaag
attgacgccatccctttggattcttctattcgtggggatgagtctttctccacaggatcg
ggagaaacactggcagacgcagagcgggaacacatactgaaggcgcttcaacaaaccggc
tggagaattgaaggcccccggggagctgcacagatccttgatctgcagccgaataccctg
agggctcgtatgaagaagctcggcatcaaaagacctggaaccccttag
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