Syntrophus aciditrophicus: SYN_01122
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Entry
SYN_01122 CDS
T00346
Name
(GenBank) transcriptional regulator, sigma-54-dependent
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
sat
Syntrophus aciditrophicus
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sat03000
]
SYN_01122
Transcription factors [BR:
sat03000
]
Prokaryotic type
Helix-turn-helix
Other families
SYN_01122
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GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_3
PAS_8
HTH_8
PAS_9
Mg_chelatase
AAA_5
PAS
AAA
AAA_2
ATPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABC76285
UniProt:
Q2LPT8
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Position
410684..412621
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AA seq
645 aa
AA seq
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MKGVAKCRKHGNRKEGKVDRALASPVSHKKSGMKKWADNVVPIRDSRPFSAGYHDLVDNA
RIGLFRTNLKGDILYVNKCGLAMLGLENLDEAKPGDALAWYRNPEDRKTFLERLGKTGRI
DQFEAECVTAKRESIVLLVNAVLEGDVITGAMIDISALKHKHEALIRREKRLADAQRIAH
LGCWDWDIVTGELFWSDEVYRIFGLRPQEFGATYEDFLARIHPDDRRTVEERVNLSLADP
GIPYSVSHRILLPDGAECKVFEKGEVTFDGFGKPVRMIGTVHPLIMRKQTEEELIRAYEE
IQALKEKLEAENTYLREEVGLQHGAGEIIGDSEAIKNTMHRALQVARTSVTVLLTGETGT
GKGIFAHFLHQNSGRADKPFVHVNCAGLPHNLIESELFGREKGAFTGSTARQIGRFELAH
GGTIFLDEIGELPLELQAKLLRVIEDGKFERLGSPHSIKVDARIITSTNRNLEDEISEGR
FREDLFFRLSVFPIIIPPLRERKADIPLLVEFFTHKCSKVHRKNIRHIPAQTMKSLENYG
WPGNVRELMNVIERAVIVTQGTELQLAGQLSAHSIRSRKERGIEGSEKPAFKGLNGVERR
HILETLQEAGWKIEGPGGAAQRLEMNPSTLRTRMKKLQIKRPETL
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
ttgaagggcgtggcgaagtgcagaaaacacggcaacagaaaagaaggaaaggtggataga
gctttggcatctccggtttcacacaaaaaatccggcatgaagaaatgggcggacaatgtc
gtcccgatccgggattccagaccgttttccgccggttatcacgatcttgttgacaatgcc
cgaatcggccttttcagaaccaatctcaaaggcgatattctttatgtcaacaaatgcggt
ctggcgatgctgggtttagaaaatctcgatgaggccaagccgggagacgctctcgcctgg
tatcggaatccggaggaccggaaaaccttcctggaaagactggggaaaaccggccggatc
gatcagtttgaggcggaatgtgtcacggcaaaaagggaatccattgttctgctggtcaat
gccgtccttgaaggggacgttataacgggggcgatgatcgatatttccgctttgaagcac
aagcacgaggccctcatcaggagggagaaaaggctggccgacgcccagcggatcgcccat
ctgggctgctgggactgggacatcgtcacgggggaactgttctggtccgatgaggtctat
cggatcttcgggctgcgtccccaggaattcggcgcgacctatgaggattttctcgcccgg
atccatcccgacgaccgccggaccgtcgaagagcgtgtgaatttgtcccttgccgatccc
ggtatcccttactcggtgagtcaccggatactccttcctgatggagcagaatgcaaagta
ttcgaaaagggtgaggtgacctttgacggattcggcaagccggtgcgcatgatcgggact
gtccacccgcttattatgcgaaaacagaccgaggaggaactgattcgtgcctatgaggag
atccaggcgctgaaggaaaaactggaggccgaaaacacctatcttcgtgaagaggtgggt
ctgcagcatggcgccggggaaatcatcggtgacagcgaggcgatcaaaaacactatgcac
agggcgcttcaggtggcgcgcacttcggtgacggtgcttctgacgggtgagacgggtacg
ggaaaggggattttcgcccatttccttcaccagaacagcggccgtgcggacaaacccttc
gtccacgtcaactgcgccggattgccccacaacctgatcgagagcgaacttttcggcagg
gaaaagggggcgttcaccggttcgacggcacggcagatcggccgctttgaactggcccac
gggggaaccatttttctcgatgagattggtgagcttcccctggagctgcaggcgaagctt
ctcagagtcatcgaggacgggaaattcgagcgcctcggcagcccgcattccatcaaggtg
gacgcgcggatcatcacctcgaccaaccgcaatctcgaggacgagatcagcgaagggcgg
tttcgggaggatctttttttccggctcagtgtttttccgatcatcatcccgcccctgcgc
gagagaaaagcggacattcctcttctggtagaattttttactcataaatgcagcaaggtt
cacagaaaaaacattcgccacatccccgcgcagaccatgaagtccctcgaaaattacgga
tggccgggaaacgtccgggagctgatgaacgtgatcgagcgggcggtgatcgtcacccag
gggaccgaactccagcttgccggacaactcagcgcccactctatcagatccaggaaagag
agggggatcgagggttcggaaaagccggccttcaaagggctcaacggagtggaacgccgg
catatcctcgaaacgcttcaggaagcgggatggaagatcgagggtccgggaggcgcggcg
cagcgcctggaaatgaacccgagcaccctgaggacccggatgaaaaaactgcagatcaaa
cggccggaaacattatag
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