Syntrophus aciditrophicus: SYN_01228
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Entry
SYN_01228 CDS
T00346
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
sat
Syntrophus aciditrophicus
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sat03032
]
SYN_01228
03036 Chromosome and associated proteins [BR:
sat03036
]
SYN_01228
03400 DNA repair and recombination proteins [BR:
sat03400
]
SYN_01228
DNA replication proteins [BR:
sat03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SYN_01228
Chromosome and associated proteins [BR:
sat03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SYN_01228
DNA repair and recombination proteins [BR:
sat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SYN_01228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
VP7
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ABC78340
UniProt:
Q2LW81
LinkDB
All DBs
Position
complement(2488633..2488908)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKGDLVEAVTKVVGKKKLAQETVGCVLDTMTEALKKGESVTLIGFGTFKVMKRSARTGR
NPQTGKPIKIKAKKVPKFTAGKKLKEAVAKK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaggtgatttggttgaggcagtaacaaaagttgtcgggaaaaagaagttggcg
caggagaccgttggatgtgttcttgatacaatgacagaagcccttaagaagggcgagtcc
gtaacactcattggcttcggtacgtttaaggtaatgaagcgatcagccagaaccgggcga
aatccgcagacagggaaaccgatcaaaatcaaagctaagaaggtccccaagtttacggct
ggtaaaaagctgaaggaagctgtggcaaaaaaataa
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