Syntrophus aciditrophicus: SYN_01342
Help
Entry
SYN_01342 CDS
T00346
Name
(GenBank) oligopeptide transport system permease protein
KO
K02034
peptide/nickel transport system permease protein
Organism
sat
Syntrophus aciditrophicus
Pathway
sat02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SYN_01342
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sat02000
]
SYN_01342
Transporters [BR:
sat02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SYN_01342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
DUF3482
Motif
Other DBs
NCBI-ProteinID:
ABC77140
UniProt:
Q2LSS6
LinkDB
All DBs
Position
1283468..1284304
Genome browser
AA seq
278 aa
AA seq
DB search
MDKDFRRRFIKNRLALAGSVLVLILFVVSLLAPWLAPYDPNAIDLNNILAPPSAAHWFGT
DQLGRDVCSRMIWGAGISLKVGFVATGIAIVIGTILGAVAGYYGGWVDALIMRFVDIMLC
FPTFFLILAVIALLEPSIWNIMIIIGITGWMGITRLVRADFISLKQRDFILAARAIGASD
LRIIFIHMLPNAMASVLVAATLGVAGAILTESALSFLGIGVQPPTPSWGNILTAGKDNID
IAWWLSLYPGLAILLTVLGYNLLGEGIRDSLDPRLRRR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggataaggattttcggcgtcgatttataaaaaaccgccttgctctggcggggagcgtc
ctggtgctgatcctctttgtcgtttccctgcttgcgccctggctggccccttacgacccc
aacgccatcgatctgaataacatccttgcgccgccgtcagccgcgcactggttcgggacg
gaccaactggggcgggatgtctgcagccggatgatctggggggcggggatttctctcaag
gtcggcttcgtggcgacgggcatcgccattgtcatcggaacgattctgggagcggttgcg
ggctactacggcggctgggtggatgccctgatcatgcggttcgtggacatcatgctctgc
ttccccacgtttttcctgatcctggccgtgatcgccctgctggagccttccatctggaac
atcatgatcatcatcgggattacgggctggatggggatcacgcggctggtgcgcgccgat
ttcatctcgctgaaacagcgggattttatcctggcggcccgggccatcggggcaagcgac
ctgcggatcatctttatccacatgctgcccaatgccatggcctccgtgctggtggcggcg
accctgggcgtcgcgggggcgatcctgaccgaatcggcgctgagttttctgggcatcggg
gttcagccacccacaccaagctggggaaacatcctcaccgccggcaaggacaacatcgac
atcgcctggtggctgtccctctatcccggactggcgatccttctcaccgtgctgggctac
aacctccttggcgaggggatccgcgactccctcgatccccgtctgcgccgccgctga
DBGET
integrated database retrieval system
