Syntrophus aciditrophicus: SYN_01633
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Entry
SYN_01633 CDS
T00346
Name
(GenBank) nif-specific regulatory protein with sigma 54 interaction domain
KO
K02584
Nif-specific regulatory protein
Organism
sat
Syntrophus aciditrophicus
Pathway
sat02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SYN_01633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sat03000
]
SYN_01633
Transcription factors [BR:
sat03000
]
Prokaryotic type
Helix-turn-helix
Other families
SYN_01633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
AAA
Mg_chelatase
AAA_3
GAF_3
HTH_28
bpMoxR
HTH_50
AAA_16
HTH_29
AAA_2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ABC78925
UniProt:
Q2LXW8
LinkDB
All DBs
Position
3058831..3060372
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AA seq
513 aa
AA seq
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MSKHNYEELAALHAIARTLAQPGELRDQLERVLQEMNQRVGMQRGMISLLDRESGEVWLD
VAHGVDIQGMEVSYQPGEGITGKVAQTGRPMAVANLGQETHFLDRTGARRFLNRSELAFL
CVPIIYDNRVVGVLSADKAARQVEDLDRELAMLSSISELIAKSVHIRALEEENRRLRHML
GRSTVPDSEIIGHSRVMQEVFGLIAQVADSNTTVLINGETGTGKELVARAIHDRSSRCKG
PLIQVNCAAMPDTLIESELFGHEKGAFTGALHARRGRFEEAHGGTIFLDEVGELSAAAQA
KLLRVIQEKKFQPLGASRVVSVDVRIIAATNRNLEEDVAVGHFRADLYYRLNVFPIYLPP
LRERGSDIILLADYFVLKYNKIMGKSVKRISNAVLEAFLSHSWPGNVRELENCIERAVLL
ATGDSIETLHLPPSLQIRSREGEKKESGKFNAMIESQERAMIVDALKESHGNQSQAARIL
GTTKRIIQYKIQKFGIDPRRFNPKHAGSSTISG
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaaacataattatgaggaactggcggcattgcatgccattgcaaggactctggct
cagcccggggaactgcgggatcaactggagcgggttcttcaggagatgaaccagagggtc
ggaatgcaacggggaatgatctctctgctggacagggaaagcggtgaagtctggctggat
gtggctcacggggttgacatccaggggatggaagtctcctaccagcctggagaggggatt
accggcaaggtcgctcagacgggacgccccatggccgtcgccaatctggggcaggaaacc
cattttctcgaccggaccggagcgcggcgatttctcaatcgctcggaactggcctttctc
tgtgtgccgattatttatgacaatcgggtggtcggggtcctgtccgccgataaggccgcc
cgccaggtggaggacctggatcgggaactggccatgctttcctccatatccgaactcatt
gccaagagcgttcacatccgcgccctggaagaggaaaaccggcgcctccggcatatgctt
ggccgctcgactgtgccggattccgaaatcatcggtcattccagggtcatgcaggaagtc
ttcggcctcattgcccaggtggccgattccaatacgaccgtgctcatcaacggcgaaacg
gggacaggaaaggagctggttgcccgggcgatccacgaccgcagctcccggtgcaagggg
cctctgattcaggtgaattgcgccgccatgccggataccttgatcgaaagcgaacttttc
ggccacgaaaaaggggcgtttacgggagcgcttcacgcgcgtcggggacgtttcgaggag
gctcatggcggtaccattttcctcgatgaggtcggcgagctgtccgcggcggcccaggca
aaactgctgagggtcattcaggagaagaagtttcagcctctaggcgcttcgcgcgtggtc
tccgtagatgtccgcattatcgcggcaaccaaccggaatctggaagaggatgtggcagtg
ggtcacttccgggccgatctgtattaccggttgaatgtctttccgatttacctcccgccg
cttcgggagcggggaagcgacatcatcctcctggccgattattttgtattgaagtataat
aaaataatggggaaatccgtaaagcggatttcgaatgccgttctggaagcctttttaagc
cattcctggccgggcaacgtccgggaacttgaaaactgcatagaacgggcggttctgctg
gcaacaggggattccatcgaaacactccatctgcctccctcactccagatcaggagccgg
gaaggagagaagaaggaatcaggcaaatttaatgcgatgatcgaatcccaggaaagggcg
atgattgtggacgcactcaaggaaagtcatggcaaccaaagccaggcagcacgaattctc
gggacaacaaaacgcatcattcaatacaagatccagaaattcgggatcgatccccgtcgg
tttaaccccaaacatgccggttcatccacgatttccggctga
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