Syntrophus aciditrophicus: SYN_01783
Help
Entry
SYN_01783 CDS
T00346
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sat
Syntrophus aciditrophicus
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sat03016
]
SYN_01783
Enzymes [BR:
sat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SYN_01783
Transfer RNA biogenesis [BR:
sat03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SYN_01783
Prokaryotic type
SYN_01783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
Motif
Other DBs
NCBI-ProteinID:
ABC78551
UniProt:
Q2LWU1
LinkDB
All DBs
Position
complement(2695069..2696007)
Genome browser
AA seq
312 aa
AA seq
DB search
MDGILILDKSPGKTSQKVVQEVKRILGVRKAGHAGTLDPLATGVLPLCLNEATKLVQFLS
LDDKEYRATMLLGVTTETMDIEGRITDRREPEVDEVRIREALQFFTGPISQEPPRYSAVK
FKGRPLYSWARKGVDIALPPRTVQVYSSILEEIALPYVTFRVACSKGTYIRTLCADLGER
LGCGACMSVLRRLRCGCFTLETAVSLEDIADGKGRETLLSRVIPLSDGLRNVAAIEISEE
LSGRIRDGFQPDGSTLREYHIPSLADGDMVKFLTSSGGLVAVARFLYASDQLAVSDMGQP
AVRILRVFHDRA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggacggtatcctgatccttgataaatcgccgggaaagacctctcaaaaagtggttcag
gaggtcaagaggattctgggggtccggaaagccggacatgccggcaccctcgatccgctg
gccacgggagtgcttcccctctgcctgaatgaggcgaccaagctggtccagtttctttct
ctggatgacaaggaataccgggctacgatgctgttgggcgtaacgacggaaacgatggat
atcgaggggcggattacggaccgccgggaaccggaagtcgatgaggtccggattcgcgag
gccctgcaattctttaccggtccaatcagccaggaaccgccccgctattcggccgtcaag
ttcaaggggaggccgctttactcctgggcgaggaaaggggtcgacattgccctgcctccg
cggaccgtccaggtttattcttccatactggaggagattgcgcttccctacgtcaccttc
agggtggcctgttcaaaggggacctatattcgcactctctgcgccgatctcggagagcgc
ctgggctgcggggcctgcatgtcggtgctgcgcaggctgcgctgtggctgttttaccctg
gagacggcggtatctcttgaggatatcgcggacggaaaaggtagagagacgcttttgtcc
agagtaattcccctgagtgacggtttgcggaatgtggcggccatcgagatcagtgaggaa
ctttcaggcaggattcgagacggcttccagcccgatggaagcactctgcgggagtatcat
attccttcccttgcggatggagatatggtaaagttcctcacctcgagcggcggactggtg
gctgtggccagattcctgtatgcatcggaccagttggcagtgagtgacatggggcagccc
gccgtcaggattttgagggtttttcacgacagagcctga
DBGET
integrated database retrieval system
