Syntrophus aciditrophicus: SYN_01904
Help
Entry
SYN_01904 CDS
T00346
Name
(GenBank) ATPases of the AAA family
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sat
Syntrophus aciditrophicus
Pathway
sat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SYN_01904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sat03019
]
SYN_01904
03009 Ribosome biogenesis [BR:
sat03009
]
SYN_01904
04131 Membrane trafficking [BR:
sat04131
]
SYN_01904
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sat04147
]
SYN_01904
Messenger RNA biogenesis [BR:
sat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
SYN_01904
Ribosome biogenesis [BR:
sat03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
SYN_01904
Membrane trafficking [BR:
sat04131
]
SNARE
SNARE associated proteins
Others
SYN_01904
Autophagy
Aggrephagy
Other aggrephagy associated proteins
SYN_01904
Exosome [BR:
sat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SYN_01904
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DUF4032
AAA_lid_3
nSTAND3
AAA_22
Mg_chelatase
RuvB_N
AAA_5
Parvo_NS1
AAA_19
ABC_tran
AAA_18
AAA_28
EF-hand_EFHB_C
IstB_IS21
AAA_24
AAA_33
AAA_11
TIP49
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
ABC77595
UniProt:
Q2LU38
LinkDB
All DBs
Position
1785581..1786702
Genome browser
AA seq
373 aa
AA seq
DB search
MEDVPSYYIEVGVMNENLHDTPSPEECVARIFELSGTKLEPDVASGLWQQILNHKWFLSE
KVGRDIGMRAACIDFLENIQQATGEYKAYKNRNILNEMGAQVIGRSIWNTIADTQPPKQL
VKRRIILPLTREGLSRKHGVVPPKTILFFGPPGTGKTHFARAIAGILSWWYVEIAPSMLM
VDGMEKIGANLRSIMEKVRILDELVLFIDEFEEIAASRDNGDRIDKSITNEFLKQLPLLK
NQGNKILLVCATNYIQQLDEAMLRPGRFDCIIPVGGLDREGSKTILQNYLSKLNVGEIDL
NQVAEMTTGFTPADIEYLFQKIAQFAFEQELATKQDYRVTTETLLQIIPTIRPSLTDKTR
EKFEKDIVAYSRF
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgtgccttcttattatatagaggttggcgtgatgaatgaaaacttgcatgac
accccttcgccggaagagtgcgtagctcggatcttcgaattgagcggtaccaaacttgaa
ccggatgtcgcgtccggactctggcaacaaatactaaaccacaagtggttcttatcggaa
aaagtggggcgggatatcggtatgcgcgccgcctgcattgatttcctggagaatatccag
caggcgaccggcgaatacaaggcttataagaacaggaacatattaaacgagatgggggct
caggtgatcggaagaagcatatggaataccatagccgatactcaacccccgaaacaactg
gtcaagcgcaggatcattctgccattaacccgggagggcctttccaggaagcatggagtc
gttccccccaaaaccatcctcttcttcggccctcccggtaccgggaaaactcactttgca
agggcgatcgccggcatcctttcctggtggtacgtagagattgcacccagcatgttgatg
gtggatggaatggaaaagatcggcgctaatctgaggtcgataatggagaaagtaaggata
ctggatgaattggttctcttcattgatgagtttgaagaaatcgccgccagtcgtgacaat
ggggaccggattgacaagtccattaccaacgagtttcttaaacagttgcccttgcttaaa
aaccaggggaacaagattcttctcgtgtgcgccactaactacatccagcaactggatgag
gcgatgcttcgtccgggcaggttcgactgcattattccagtcggcggattggacagggaa
ggatccaagaccatcctgcaaaactatctttccaagctgaacgtcggcgaaatagacctc
aatcaagtagcggaaatgacgaccggatttaccccggcggatatcgaatatcttttccag
aagatcgcacagtttgccttcgaacaagaactggctaccaagcaggattaccgagtcaca
acggaaaccttgctccaaataatacccacgatccgtccatccctgactgataagacgagg
gaaaaatttgaaaaggacattgttgcttattcgaggttttaa
DBGET
integrated database retrieval system
