Syntrophus aciditrophicus: SYN_01911
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Entry
SYN_01911 CDS
T00346
Name
(GenBank) uvrD/rep helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sat
Syntrophus aciditrophicus
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sat03400
]
SYN_01911
Enzymes [BR:
sat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SYN_01911
DNA repair and recombination proteins [BR:
sat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SYN_01911
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
DUF2800
MEDS
Motif
Other DBs
NCBI-ProteinID:
ABC77602
UniProt:
Q2LU40
LinkDB
All DBs
Position
complement(1792872..1795778)
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AA seq
968 aa
AA seq
DB search
MPLQGSLPQTRPLSDDRTTRRPPMVKSLFVTASAGSGKTFRLTREVRSHLDREGEFVVAA
TFTRAAAAEMEKRILDAIDEGKESPVDKLRFIMRAARVHFSTIDALFHQFLSTEAYVPQL
ADDHEKAIIATLADTRFFQHPRVLADIESIVIAARILHLQPDSLIAELDKGRESLEAWDC
PERLLDALKGEQSRLVAEYDQLRAKVQVVAEATRGALRSQVAAPLLEPLAGVDLKRALFL
KDNLADVRVAAADRATPAYAALEDLYPRMRVLISEHLINTKRLRSALLKRFIALRADVIA
EEKEKLGRLFFDDVPRKLIALDGPDSPDRPLFAARLYEMGFHRTAHLLLDEFQDTSQIQF
TLLRPLIEDILGSVGSNAEGDRSIFLVGDWKQSIYQWRGAAPDMLRASLTPALASGQIAA
ETLPYNYRSTPLLIEFFNHLVADLFAGTDKVNMQAPPEKPKHPYGGISEVAVIPVACGAG
DEPVYERLIEAIVKKKAECGRPWGDIAVLCRTNRHMDRAAAALARAGIPTSGIRGREMLS
LREGTALYLSLIALFTAHDGRFIPRALKSLDYGEAQGATLMSAVAQLAETVGNAPRPHRF
AAFASALRDLAPHFPRILIETLWDEAERYFVRPDAVDAAAFLRYLLTMSHLITIPEGEHA
DRVKLATIHGTKGLEFPHVFLFWKEEHDRAPEIPHPEDGCPLSLSKDELAFLATDPIEGA
AAIAEAVTVVKEERAEETANIIYVAATRAAKSLTILLRADREGALKGYSERMFTTAQEPI
ADAERTEFGWRHDYGLEKPRPADHEDLIEPDLGDLPAVPADSDEMDAALRSAAIEAGIER
GLRIHAILARLTCDRQTIAPDSLAAEEQAVVERFLHEEKVREILFRPGKVLVEQHISDTR
TFGIVDRLIIAPDRITLIDFKTGRVGHLADKYRPQMLRYRMILQGLFAGRPVECYLLFVD
EPQRIVII
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
ttgcccctacaaggctctctgcctcaaaccagacctctatcagacgataggacgaccagg
aggccacccatggtgaagagccttttcgtcaccgcctcggccggttcggggaagaccttc
cgcctgacccgtgaggtccgcagccacctcgaccgggagggagaattcgttgtcgccgcc
accttcacccgcgccgcggcggcagaaatggaaaaaaggatcctcgatgctatcgacgaa
gggaaggagagccccgtcgacaagctgcggttcatcatgcgggccgctagggtccacttc
tccacgatcgatgcgctctttcaccagtttctttccactgaagcctatgttccgcagttg
gcagacgaccatgagaaggcgatcatcgccacgctcgccgacacgcgttttttccagcat
ccgcgcgttctggccgacatcgaaagcatcgtgatcgcggcccgaatcctccatctgcaa
cccgattccctgattgcggagctggataagggcagagagtcactggaggcatgggactgc
cccgagcgtctgctcgatgcactcaagggcgaacagtcgcggcttgtcgccgagtacgat
cagctgcgtgccaaggtgcaagtcgtcgcggaagcgacgcggggagccctgcgcagccag
gtggccgcccccttgcttgaaccgctcgccggggtggacctcaaacgggcgcttttcctc
aaagacaacctcgctgatgttcgcgtagctgcagccgatcgcgccacgcccgcctacgcg
gccttggaggacctctatccgcgaatgcgcgttctgatctccgaacacctcatcaacacg
aaacggttgcgaagcgcccttctcaagcgtttcatcgccctgcgtgccgacgtcattgcc
gaggagaaggaaaaactcggacggctcttcttcgacgacgtcccacggaagctcatcgcc
cttgatggaccggacagccccgaccgaccgctttttgctgcacgcctctatgaaatgggc
ttccaccgaacggcccatctgctcctcgacgagtttcaggacacgtcgcaaatccagttt
accctgcttcggcctttgatcgaagatatcctcggctccgtggggagcaatgccgaggga
gaccggtcgatcttcctcgtgggagactggaaacagtcgatctatcagtggcggggggcg
gcgcccgatatgctccgggcctcgctcaccccagccctcgcgagcggacagattgctgcc
gagactcttccttacaactaccgttcgacaccgcttcttatcgaatttttcaaccatctg
gtcgccgacctcttcgccggaaccgacaaagtcaacatgcaggcgccgccggaaaagccg
aagcacccctacggcggcatctccgaggtggcggttatcccggtcgcctgcggagcggga
gacgagccggtgtacgagcggctcatcgaagcaattgtcaaaaaaaaggcggagtgcggt
cgcccctggggcgatatcgcagtgctgtgccgcaccaacaggcatatggatagggccgcc
gcggcgctggccagagccggaatccccacctcggggatccgcggccgcgagatgctgtca
ctccgggagggaacggcgctctatctttcgctcatcgcgcttttcacggcccacgacggc
cgcttcattcctcgcgccctcaagtctttggactatggcgaggcccagggcgcgacattg
atgtccgccgtcgcgcagctcgccgaaactgtcggcaacgcgccccggccgcaccggttc
gcggccttcgcatccgccctgcgcgaccttgcgcctcattttccgcgcatcctcatcgag
acgctctgggatgaggcggagcgatacttcgtccggcccgatgccgtcgatgccgccgcc
ttcctgcgttacctgctcaccatgtcgcaccttatcaccatacccgagggagagcatgct
gaccgggtgaagctggccacgatccacggtaccaagggccttgaatttccccatgtcttt
cttttctggaaagaggagcacgacagggcgcccgaaattccgcaccccgaagatggctgt
ccgctcagcctgagcaaagacgaactggcttttctcgctaccgacccgatagaaggagct
gcagccattgccgaggcggtaactgttgtgaaggaagaaagggccgaagagacggccaat
atcatctacgtcgccgcgacccgcgccgccaagagtctgacgatcctcctgcgggcggac
cgggagggcgccttgaagggctacagtgagcgaatgtttacaacggcccaggaacctata
gcggacgccgagcgcaccgaattcggctggcggcatgactacggcctcgaaaagccgcgc
cccgcggaccatgaggatctgatcgagcctgatctgggcgatctccccgccgtgccagcc
gacagcgacgaaatggacgcggccctgcgctccgccgccatcgaggcgggaattgagcgc
ggtcttcgcatccacgcgatcctcgcccgcctcacatgcgatcgccaaacgattgcccct
gacagcctcgccgcagaagagcaggccgtggtcgagcggttcctgcacgaagagaaggtg
cgagagatcctcttccgacccgggaaggtcctcgtcgaacagcacatctccgacacccgc
accttcggcatcgtggaccggctcatcatcgcccccgaccgcatcaccctcatcgacttc
aagacgggtcgcgtcggccatttggctgacaagtatcggccccagatgctccgctaccgg
atgattctccaggggctgttcgcagggcgtccggtcgagtgctatctgctgttcgtggac
gagccgcaacggattgtgataatttaa
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