Syntrophus aciditrophicus: SYN_01978
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Entry
SYN_01978 CDS
T00346
Name
(GenBank) ABC transporter ATP-binding protein
KO
K06020
energy-dependent translational throttle protein EttA
Organism
sat
Syntrophus aciditrophicus
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sat03016
]
SYN_01978
Transfer RNA biogenesis [BR:
sat03016
]
Prokaryotic type
tRNA transport factors
tRNA export factors
SYN_01978
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GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_tran_Xtn
SMC_N
AAA_16
AAA_22
AAA_23
MMR_HSR1
AAA_29
nSTAND1
AAA_18
DO-GTPase2
NB-ARC
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
ABC77742
UniProt:
Q2LUI3
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All DBs
Position
1939652..1941337
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AA seq
561 aa
AA seq
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MSQDPHKIIYSMIGVTKVYDKKPVLRDISLSYFYGAKIGVLGLNGSGKSSLLRILAGVDK
EFNGKTIPSPGYSIGFLEQEPQLDNALTVREIVEQGVQKTVDLLSEYNRISEQFAEPMSD
EEMTRLCDRQAEVQEKLDALDAWDLDSRLEMAMDALRCPAGDTPVSVLSGGERRRVALCR
LLLQKPDILLLDEPTNHLDAETVAWLEHHLKTYEGTIIAVTHDRYFLDNVAEWILELDRG
EGIPWKGNYSSWLEQKQNRLRKEEKRETERQKTLERELEWIRMSPKGRHAKSKARISAYE
SLLGQEGEKRGGELEIYIPPGPRLGKVVIEAEHLRKAFGDRILIDDLSFALPPGGIVGVI
GPNGAGKTTLFRMITGQETPDSGTLRVGDTVTLAYVDQSRDILDPGKTIWETISEGLDTL
SLGSRQVNSRAYVARFNFSGTDQQKKVGALSGGERNRVHLARMLKEGANVLLLDEPTNDL
DVNTMRALEEALENFAGCAVVISHDRWFLDRIATHILAFEGDSRVVWFEGNYSEYEADRR
TRLGTAADQPHRIKYRQLTRI
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggatccccacaaaattatttattccatgatcggagtcaccaaggtttacgat
aaaaaaccggttctcagggatatttccctttcctatttttacggcgccaaaatcggcgtc
ctcggccttaacggctcgggaaagagttcccttctgcgcatcctggccggagtcgacaag
gaattcaacgggaaaacgattccctcgccgggttattccatcggctttctggaacaggaa
ccgcagctggataacgctctgaccgtccgggagatcgtggaacagggtgttcagaagacg
gttgatctgctttcggaatacaaccggatcagcgagcagttcgccgaacccatgtccgat
gaggagatgacccgtctgtgcgaccgccaggccgaagtccaggaaaagcttgacgccctg
gacgcctgggacctggattcccgactggaaatggccatggatgctttgcgctgtccggct
ggcgatacgcccgtgagcgtgctttccggaggagagcggcggcgggttgccctgtgccgt
ctccttctgcagaaacctgacatcctgcttctcgacgagcccaccaaccatcttgatgct
gaaactgtggcctggctggagcatcatctgaaaacctatgagggaacgattatcgccgtc
acccatgaccgctatttcctggacaatgtcgccgaatggattctggaactggatcggggc
gagggaatcccctggaagggaaactactcttcctggctggagcagaagcagaatcgcctg
cgcaaggaggaaaagagggaaacggaacgacagaaaaccctggagcgggaactggaatgg
atccggatgagtcccaagggccgccatgctaaatccaaggcccgcatctctgcctatgaa
tccctccttggccaggaaggggaaaagcgtggcggcgagctggaaatctacatcccgccg
ggaccgcgactgggcaaggtcgtcatcgaggcggaacatctccgcaaggccttcggcgac
cggattctcatcgatgatctctcctttgccctgccgccgggcggaatcgtcggcgtcatt
ggccctaacggcgcgggaaagaccactctcttccggatgattaccggccaggaaactcca
gacagcggtacgctccgcgtcggcgataccgtaacgctggcctacgtggatcagagccgg
gatatcctcgatcccgggaaaacaatctgggagacgatctctgagggtcttgacaccctt
tccctgggcagccgccaggtcaactcccgggcctatgtcgcccgcttcaacttttcggga
acggatcagcagaaaaaggtgggggctctctccggcggcgaacggaatcgcgttcacctg
gcgcggatgctcaaagaaggcgccaacgtccttcttcttgacgaaccaacaaacgacctg
gatgtcaacacgatgcgcgccctggaagaagccctggaaaatttcgccggctgcgctgtc
gtcatcagtcacgaccgctggtttctggatcgcattgccacccatatccttgccttcgag
ggtgacagccgtgtcgtctggtttgaaggaaactactctgaatatgaagcggaccggcga
acccgtctcgggaccgctgccgatcagcctcaccggattaaataccgtcagttgacccgg
atctga
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