Syntrophus aciditrophicus: SYN_02071
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Entry
SYN_02071 CDS
T00346
Name
(GenBank) swf/snf family helicase
Organism
sat
Syntrophus aciditrophicus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
HDA2-3
Motif
Other DBs
NCBI-ProteinID:
ABC79028
UniProt:
Q2LY67
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Position
3155069..3159292
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AA seq
1407 aa
AA seq
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MNEQQQSVAGSRKREKLSSLYEGLSPGEQILVQFCSLFMEPVSMTTVIRCFDVTGIAFAG
LGKTSWQNLQPALKRIVKLGLVDDHYQCPESFREIATRRAVAEGHFEKMARSIQRLMPGN
RYLSRYSPEYDWRRVLRDFRIAFYRQDSREVKTLYDSMLRFCPMPYRTPDPFLRVCNQPF
DRVWFGTLPLDLRSAALSRILLQSLIFLEPDEAPLNEALDLVSGDRLTEQGGLPLPEVLA
LRPLLHILILRLLLGGRLADARQLLREIGRREEGYTGGLQGCLYFLEGKNEEAIAATESD
LRLLARKTGVRNNFFTDPVGLFFLLALLKAYAAQPDAAGAAKLKKYLYLTVHRNNPSNFY
VTSLTALRKIAAALMMEPEYPDYDSLPERPEIGTVFAALAEFWQKRRLTSKTITSLQTLY
QRARGNGMAWAMMECAGLLTAAGVNPPLYRQQAEEISAGAGLVSLIPSIHFEEPWRKSLR
ALTQTAAMERPSIVSKEKRLIWLFLYGEEGLSLKPLEQRQKARGGWTSGRPVALSRLHKG
TNLEYLSRQDHMIRATLKAEARYYGGYSGADYYFDWEKTLPLLVGHPLIFSEENPEKPVE
FLRGEVELMVTESTEGLCLRLSVPLTESRVVLMPENPSRFRICEISDAHHRIGQILSSKG
LIVPAAARNELMAAMAELSSLVTIHSTIGGSAESLEEIEGDPRPVIQLAPAGDGFHLELL
VRPFGSGGTRLKPGKGMEHVMADMDGKHLLARRDLALEIRNVKLLEDRCPTLFMVMNDRG
QGYLENPEDCLDLLLELNPLQEAEEVVIEWPEGESLKTPQQASFEQMRLKVHKVGDWFEL
DGQLQLDEGLVMDMKTLLELVESSPRRFLPLGEGRFIALTEALRRRLDEMNVYADRRGKT
VRCHALAIPVLDGIFDDFTQVNRDSSWKERVKTFQKGMTLQPVVPSTLQAELRDYQVAGY
EWMIRLSSWGAGACLADDMGLGKTLQALAVMLERGPKGPTLVIAPTSVCMNWQAEINRFA
PTLNPVLFGGRNREERIGKLKGMDVLICSYGLLQQESELLATAHWHTIVLDEAQAIKNFE
TQRAQAALSLKGDFRLITTGTPIENHLGEFYTLFDFINPGLLGSRPQFNERYAIPIEKNG
DREARKRLKKLISPFLLRRIKSQVLDELPPRTDVVLQVEMSPEETALYEAMRRQAVETLE
QNDSPVGQKHLKILAEIMRLRQACCHPRLVVPDSELTSSKLALFGEVVEEMLENSHKALV
FSQFVSHLALIQDYLKQKGIEYRYLDGGTPPKERRREVEAFQAGKGSLFLISLRAGGVGL
NLTAADFVIHMDPWWNPAVEDQASDRAHRIGQKRPVTVYRLVTKNTIEEKILKLHASKRD
LADSLLDGSDISGRMSADELFQLIREG
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagcaacaacaatccgtggccgggtcaagaaagcgtgagaaactgtcaagcctg
tatgaggggttatcgccgggagaacagatcctggtgcagttctgctccctgtttatggaa
ccggtgagcatgacgaccgtgatccgctgtttcgatgtgacgggcattgcctttgcggga
ctcggaaaaaccagctggcagaacctgcagccggcgctgaaacgcatcgtcaagctggga
ctcgtggatgaccattatcaatgtccggaaagcttccgggaaatcgccacccggcgggcc
gtcgcggaagggcattttgaaaagatggcccggtcgattcaacggctgatgcccggcaat
cgctatctttcccgttattctcccgaatatgactggagacgcgtcctgcgggatttccgc
atcgccttctaccggcaggattcaagagaggtaaaaacgctttatgattcgatgcttcgc
ttctgccccatgccttaccgcaccccggatccctttctgcgcgtctgcaaccagcccttc
gaccgggtctggttcggcacgctgcccctggatctccggtccgccgctctctcccgcatc
ctgctccagagcctgatctttcttgaacccgatgaagcgccgctgaacgaggccctggat
ctggtctccggagacagactgacagagcaaggcggcctcccactccccgaggtgctggcc
cttcgtcccctgcttcacatcctgatccttcgactccttctcggaggccgccttgctgac
gcccgccagcttctcagggaaattggccggagagaggaaggatacaccggcggcctgcag
ggatgcctttatttcctcgaagggaagaatgaggaggccattgcggcaacggaatcggat
ctccgcctgctggcccggaaaaccggcgtccggaataatttctttaccgacccggtcggc
ctttttttcctgctggccctcctgaaggcttatgcggctcaaccggatgcggcgggggct
gcgaaactcaaaaaatacctgtatctgaccgtccatcgcaacaatcccagcaatttctat
gttacaagtctgaccgccttgagaaaaatcgccgccgccctgatgatggagccggaatac
ccggattacgattctctgccggaacgaccggaaatcggaacggtttttgccgccttggcg
gaattctggcagaagcgccgtctcacctcgaaaaccattacgtcgctgcagacgttgtat
cagagagcccggggcaacggaatggcctgggccatgatggaatgtgcaggcctcctcact
gccgccggcgtcaatccgcctctgtaccgacagcaggcagaggagatcagcgccggcgcc
ggtctggtttccctcatcccgtcgatccatttcgaagagccctggcgtaaaagcctccgg
gccctgacccagacggcggcgatggaacgcccctctatcgtttccaaggaaaaaaggctg
atctggctgtttctttatggagaggagggcctgtccctcaaaccgctggaacagcggcag
aaggcccggggcggctggacctcggggcggcccgtcgccctcagccggctgcacaagggg
accaatctggaatacctgagtcggcaggatcacatgatccgggcgaccctgaaagcggaa
gcccggtattacggtggttacagcggcgccgattactatttcgactgggagaaaaccctg
ccgctgctcgtgggacatccccttattttttctgaagagaatccggaaaaacccgtggaa
ttcctccggggggaggttgagctgatggtgacggagtcgacggaggggctctgcctgcgt
ctgagtgttcccctgacggaatcccgggtggtcctgatgcccgaaaatcccagccggttc
cggatctgcgaaatttcggacgcccatcatcggatcggacagatcctgagcagcaagggg
ctgattgttccggcagcggccaggaatgagctgatggcggccatggcggaactctcctcc
ctggtgaccatccattccaccatcggcggcagtgcggaatccctcgaagaaatcgagggc
gatccccgtcctgttatccagctggcgccggccggcgatggttttcacctggagctgctg
gttcgtcccttcggcagcggcggaacccgcctgaaacctggaaaaggcatggagcatgtc
atggcggacatggatggaaagcatctcctggcccggcgcgatctcgccctggagatccgc
aatgtcaagctcctggaagatcggtgccccactctgttcatggtcatgaacgaccggggg
caggggtatctggagaatccggaagattgtctggacctgctgctggagctgaaccccctg
caggaagcggaggaagtggtgatcgaatggccggaaggcgaatccctgaaaactcctcag
caggcctctttcgagcagatgcgtctgaaagtccataaggtgggagactggttcgagctg
gacggccagcttcagctcgatgaaggtctggtgatggatatgaagaccctccttgagctg
gtggaatcttccccccgtcgttttctccccctcggggagggccggtttatcgctctcacc
gaggctctgcgccgccgcctggacgagatgaacgtctatgccgaccggcgtgggaaaaca
gtccgctgccatgccctggccattccggttctggacggaatcttcgatgactttacccag
gtgaatcgggactcctcgtggaaagagcgggtaaaaacctttcaaaagggaatgaccctg
cagcccgtcgtcccctccaccctgcaggcggaattgagggattatcaggtggccggttac
gaatggatgatccggttgtcctcctggggcgccggcgcatgtctcgccgatgacatggga
ctgggcaagaccctgcaggccctggcggtcatgctggaacgcggtcccaaaggccccacg
ctggtaatcgccccgacttccgtctgcatgaactggcaggccgagattaaccgcttcgct
cctaccctcaatcctgtcctgttcggcggccggaaccgggaggaacgcatcgggaagctc
aagggcatggacgtgctgatctgcagctacgggcttcttcagcaggaatcggaactcctc
gccacagcgcactggcacaccatcgtcctcgacgaggcccaggccatcaagaatttcgag
acccagcgagcccaggccgccctgtctttgaagggtgatttccgactcatcaccacgggc
acccccattgaaaatcatctgggggaattctataccctctttgatttcatcaatcccggc
ctgctcggctcccggccgcagttcaacgaacgctacgccattccgatcgaaaaaaacggc
gatcgggaagcccggaagcggctgaaaaagctcatttccccctttctcctgaggcggatc
aaatcccaggtgctggacgaacttcctccccggaccgatgtggtcctccaggtggaaatg
tcgccggaggaaacggccctctatgaggccatgcgccggcaggccgtggaaaccctggaa
cagaacgacagccccgtcggacaaaagcacctgaaaatcctggcggaaatcatgcgcctg
cggcaggcctgctgtcatccccggctggtcgtgccggacagcgaactgaccagttccaag
ctggctctcttcggggaggtcgtggaggaaatgctggaaaattcccacaaggcgctggtt
ttcagccagttcgtcagtcatctggctttgatccaggattacctgaagcagaagggcatc
gaataccgttacctcgacggcggcacaccgccgaaagagcggcggcgggaggtggaggcc
ttccaggcgggaaagggctccctcttcctgatcagcctgcgggccggcggcgtgggcctc
aacctgaccgccgcggactttgtcattcacatggatccgtggtggaatccggcagtggag
gaccaggcctcggatcgggcccaccgcatcggtcagaagcggcccgtgacggtgtaccgc
ctggtgacaaagaacaccattgaagaaaaaattctaaaactgcatgcaagcaagcgggat
ctggccgacagtctgctggatggcagcgatatcagcggccggatgtcggcggacgagctg
tttcagctgatccgggaagggtaa
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