Syntrophus aciditrophicus: SYN_02178
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Entry
SYN_02178 CDS
T00346
Name
(GenBank) uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sat
Syntrophus aciditrophicus
Pathway
sat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SYN_02178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sat03400
]
SYN_02178
Enzymes [BR:
sat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SYN_02178
DNA repair and recombination proteins [BR:
sat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SYN_02178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABC77430
UniProt:
Q2LTM2
LinkDB
All DBs
Position
1603016..1603807
Genome browser
AA seq
263 aa
AA seq
DB search
MIEMNESDILKDELYTLVRSLKNQIELAWELRHPLSWTTAEGDQKSPFLGMKLASGVHEQ
DVKESLISSDITGPADNPLETLDDIRRDMEACHRCPLEKTRKNLVFGEGNPHSELVFVGE
APGADEDLQGRPFVGRAGHLLTRIIDAMGLKREDVYICNILKCRPPGNRNPLPEEIEVCE
PWLIRQLEAIRPRIICALGTFAAQTLLKKKGIPITVLRGQFHDYHGIKLMPTYHPAYLLR
NPGAKRQVWEDVQKIMKVLEAGQ
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtgattgagatgaacgaatcggatatcttgaaagacgaattgtacacgctggtccgttcc
ttaaaaaaccagatcgagcttgcgtgggaacttcgacatcctttatcgtggacgacggcg
gagggagatcagaaatcgccattcctcggaatgaagctggcctcaggggtgcatgaacaa
gatgtgaaggaatcgttgatctcctccgacatcaccggtccagcggacaatcccctggaa
acactggatgatattcgacgtgacatggaagcgtgccatcgctgtccccttgaaaaaacg
cggaaaaatcttgtcttcggcgaaggcaatccccactcggaactggttttcgtgggagaa
gcgcccggcgccgacgaagatcttcagggaaggccctttgtgggacgcgccggtcatctc
ctgaccagaattatcgatgccatgggactgaaaagggaggatgtctatatctgcaacatc
ctgaaatgccgtcctccgggaaatcgaaatcccctgcccgaagaaatcgaagtttgtgaa
ccctggctgatccgacagctggaagcgatccgtccacggataatctgcgctctgggcacc
tttgcggctcagacccttctcaaaaagaagggaattcctattaccgttcttcgtggacag
tttcatgactatcatggaattaaactgatgcctacctaccatcccgcatatcttctgagg
aatccgggagcaaaaaggcaggtttgggaagatgtacagaaaatcatgaaagttctggaa
gcgggtcaataa
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