Syntrophus aciditrophicus: SYN_02261
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Entry
SYN_02261 CDS
T00346
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sat
Syntrophus aciditrophicus
Pathway
sat03030
DNA replication
sat03410
Base excision repair
sat03420
Nucleotide excision repair
sat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SYN_02261
03410 Base excision repair
SYN_02261
03420 Nucleotide excision repair
SYN_02261
03440 Homologous recombination
SYN_02261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sat03032
]
SYN_02261
03400 DNA repair and recombination proteins [BR:
sat03400
]
SYN_02261
Enzymes [BR:
sat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SYN_02261
DNA replication proteins [BR:
sat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SYN_02261
DNA repair and recombination proteins [BR:
sat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SYN_02261
NER (nucleotide excision repair)
GGR (global genome repair) factors
SYN_02261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
Anti-adapt_IraP
Motif
Other DBs
NCBI-ProteinID:
ABC76463
UniProt:
Q2LQV1
LinkDB
All DBs
Position
580069..582774
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AA seq
901 aa
AA seq
DB search
MSTGDNTENSEKSTIYLVDGSNYLYRAFYAIRELSNSRGLPTNAVYGFTNMLIKLLRERK
PEYIAITFDLKGPTFRHETYAQYKATRKATPEALIPQIPYIKDIIRGFSIPILEQQGTEA
DDIIGTLACRFAGEGLKVIIVSGDKDMLQLLSPDVIMIDTMNDRTYDVAAVRERFGVDPE
KVPEILGLTGDMSDNIPGIPGIGPKGALRLVEEYGSIEEILRNVERLRNPKLRDSVRVYG
EQALLSRDLARIRTGIPLTFDLEEARLQEPDREVLTRLFRELEFSSLLQEFSVVEDCGDN
SHTLLRTPEAVAAFMEPLKEGGFLVLEMVLSSSEPMRAELIGVALGLDSGNAGYIPLEPG
AAEKSASSLSEEQVFPVLFPFLADKKIALVGHDLKTVLIVLSQKGVKVQNPLLDTMVAAY
ILNPARRGYELSEIVQDYLHRQVEPLRKKLVGGSSPKQSPASFPPERLRDFACRRVEAIG
ELASTLIEKMEETGLRELFDSVEMPLVAVLAAMEEKGVLLDLHLLKEMSQELGHLLSLSE
AKIYALAGERFNIASPKQLQTILFEKLNLPKGKKTKGGYSTDVEVLSNLALNHELPAEIL
AYRSMAKLKSTYIDALPSLINIRTGRIHTSYNQTVAATGRLSSSNPNLQNIPIRTLEGKR
IRQAFIAPPGWAIVSADYSQIELRVLAHLSEDPVLINAFAAGEDIHSRTAADVFGVFPEM
INAEMRRQAKVINFGVLYGMSAFGLSRELGIPQKQAQAYIDGYFKKYESVKTYLDGILQQ
ARERGYVTTLLNRRRYLPEINSVNPAVRQLAERMAINAPIQGTAADLIKMAMLRIADLIR
EKGMKSAMTMQVHDELVFEVPQEEKIALMNLVRQEMEGVVELKVPLKVDIASGRNWDEAH
S
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaggcgacaatacggaaaacagcgaaaagagtacgatttatctggtcgacggc
agcaattatctgtaccgggccttttatgcgatccgggaactttccaattccagggggctt
cccaccaatgccgtctacggattcaccaatatgctgatcaagcttctccgggagcggaaa
ccggaatacattgccatcacctttgatctaaaggggccgaccttccggcatgagacttac
gcgcaatacaaagccacccggaaagcgacccccgaggccctgattccccagatcccctat
ataaaggacatcatccgcggtttttccatcccgattcttgaacagcaggggacggaagcc
gatgatatcatcggcaccctggcctgccgttttgccggggaaggcctaaaggtcatcatc
gtctccggcgacaaggacatgctgcagcttctttcccccgatgtcatcatgatcgatacg
atgaacgaccggacctatgatgtcgcggccgtgagggagcgtttcggcgtggatccggag
aaggtgcccgagatcctgggactgacgggggatatgtcggataacattcccggcattcca
ggcattggtccgaagggtgccttgcggctcgttgaagagtacggctcgatcgaagagatt
ctgcggaatgtggaacgcctgaggaatccgaaactccgggacagtgtccgggtttacggt
gaacaggccctgctgagccgcgatctggcccggatccgcaccggtatcccgctgaccttt
gatctggaagaggcccgcctccaggaaccggatcgagaggttctgactcgactgttccgg
gaactggaattttcctccctgcttcaggaattcagcgtcgttgaagattgcggcgacaat
tcccatacactgctgcgaacaccggaggctgtggcggctttcatggaaccgctgaaagag
gggggatttctggtcctggaaatggtgctttcctcgagtgaaccaatgcgggcggaactg
attggagtggcccttggactggattccgggaacgccggttatatacctctggaacctggc
gcagcggaaaagagcgcttcaagtctttcggaagagcaggtttttcccgtcctttttcca
tttctagcggataaaaaaatcgcccttgtcggtcatgatctcaaaacggttctgatcgtc
ctatcccaaaaaggggtgaaggtgcagaatcccctcctggatacgatggtggcggcctac
atcctcaatcctgcgcggcgcgggtatgaactctccgagattgtgcaggattatctgcac
cggcaggtggagccgttgcggaaaaaactggtcggcgggagctcgccaaaacagtctcct
gcgtcctttccgcctgaacgtctgcgggattttgcctgccggcgggtggaagctattggg
gagctggcttcgactctgattgaaaaaatggaagagacgggcctccgggaactgttcgat
tcggtggagatgccgctggtggcggtgctggccgccatggaagaaaaaggggttctcctg
gatttgcatctgctgaaggagatgtctcaggaactgggtcaccttctttctctttcggag
gcgaaaatttatgccctggcgggggagcgcttcaatatcgcgtctcccaagcagctccag
accatcctttttgaaaagcttaatctgcccaaggggaaaaagacgaagggaggatattct
acggatgtggaggtgttgagcaatcttgccctgaaccatgaactgccggccgagatcctt
gcctaccggagcatggccaagttgaaatccacgtatatcgatgccctgccttccctgatc
aacatccggacaggacggattcacacctcttataaccagacggtggcagcaacaggtcgc
ctctccagcagcaatcccaatctccagaacatcccgatccgcaccctggaggggaagcgc
atccggcaggcttttattgccccgccaggatgggcgatcgtctccgccgattactctcag
attgaattgcgcgtgctggcccatctctccgaagatccggtcctgattaatgcctttgca
gccggtgaagacatccacagccggacggccgccgatgttttcggcgtgttcccggaaatg
atcaacgcggagatgcgccgtcaggcgaaggtcatcaatttcggcgtgctttatgggatg
agcgcctttggcctgtcccgggaactggggattccccagaagcaggcccaggcttatatc
gatggatattttaaaaagtacgaaagcgtcaaaacctatctcgacggcatcctccaacag
gccagggaacggggctatgtaaccacactccttaaccgccgccgttatcttccggaaatc
aacagcgtcaatcccgcggtgcgtcagctggccgagcgcatggccatcaatgcgcccatt
caggggacagcggctgatctcatcaagatggccatgctcaggatcgcagacctcatcagg
gaaaaggggatgaagtctgccatgacgatgcaggttcatgatgaactggtctttgaagtg
ccgcaggaagaaaagatagcgctcatgaacctggtccggcaggagatggaaggggttgtc
gaactcaaggtccccctcaaagtggatatcgcctccggacgaaactgggatgaggctcac
agttaa
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