Syntrophus aciditrophicus: SYN_02404
Help
Entry
SYN_02404 CDS
T00346
Name
(GenBank) outer membrane protein (DUF490)
KO
K09800
translocation and assembly module TamB
Organism
sat
Syntrophus aciditrophicus
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sat02000
]
SYN_02404
Transporters [BR:
sat02000
]
Other transporters
Pores ion channels [TC:
1
]
SYN_02404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
ABC78752
UniProt:
Q2LXD8
LinkDB
All DBs
Position
complement(2895821..2899798)
Genome browser
AA seq
1325 aa
AA seq
DB search
MTSKRVKYGLFFLAGILLVVLLLSAALYHVLKTPEGSLRLLKFLGSQAGVQMKIGRSEGN
LMDGLALRNLELSTESFDARISSIFIKPSPRSLPAGFLSVEELRMEGVAVHDRRPEEKEP
PDLSWPSVPGFLGSLRGGIASLDISNIEYRRLEEPPVRIDRIQGSLEWNAGILDLKNIRI
KSPWGELRGDASAGFIIPFLNLETALDLQSGGGDGVGKFSLKAGLRKTAAPEPIAGEVSL
TAADIGGRKTGLTGIIGLAKHSVHLRDVRLLRPGLKGDMAGSAVVTFPEGEPFYSIRVKA
SHLDLSPEISFPTDISGEIDLKGVPTDYTGSYSLTNTGKTWASTVLRGSFGGDLERLKLT
LSEGKWLAGRVSGDVAVNWKEGVRLTAAVEGTGLNPAVFDPQWKGALNVTARGQLGMKAD
APPDARVQAWISRSQLLGRDLTGEADVRLRGDDLDIALLDVRGRQFAVRASGALKERIDF
RAAAGDLGELIPSARGRLSAQGWVRLRDGLTAFSAEGSGRNVSVDRFAADSLSYRMTLAA
EKDRLLDAAVNAKSLRYDSVELSAAVVRARGALSRHRISIEARAPRATADASLAGSYASG
TWRGTIEKLSGRDRSGPWRLLSPAELMISRRAVSVSPLVLAGNAGERLDLAADMFLNPLQ
GRLNASWAGIRLERISSWIPDSGLSGKTSGNLETRFARGDVALLAGKFSSSGKAAIGGRP
VSFNRAEALLNWGREGLDARLEVSLAGEGVINGRASSPAPVRLALPDQGKFEMDVRDLDP
GLFHAWLPSGVTVAGRAAGKVEGRLLPGSAFELSGKLNVLSGSATRKDEEGQISIGFRSA
AVDFSWRDADLRGRASAEFVDYGSLQAAFRIPLPARIPVVPDPSGTVAASIRGRLREAGM
LNAAFPGFVEVGKGELDLAVTVGGAWGDPRVEGRVDMAKAGAYLPAAGIELKDVSLKARM
EGTKILIDSLRANSGPGSIDLQAEIVLSGSQVSSYSGTVKGDRFQTVNLPELQLLTSPDL
RFEGNLEKLAVRGSVSVPRMLALAGQGPSVITPSRDVVVVDAPPSRGRKMPFALDVRVAV
ILGDDVRVKADGANLQLGGTVATAATGPENIRAQGTVRIVDGSYSVYGVTLKVESGRIIF
AGPADTPQLDITAARKVEDVTAGVFVGGTISSPRIRLYSRPAMQEPEILSYLVLGRALQG
EGNEPDLSLLLRAAGSILTKSESPSVISQLKSRLGLEGVEVKFTRDTSAVAGQPGTAATQ
NGLMAGSMVSIGKYLTPRLYVSFGRYLFSEQSVVKLRYKFSEKWEVETHGGTVSGADIFY
KIEFR
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcaaaaagagtcaaatacggcctgttctttctcgcggggattctgctggtcgtt
ctgctcctgtcggcagcgctctatcatgttctgaaaacacccgaggggtccctccggctg
ttgaaatttctcggaagccaggccggcgttcagatgaaaatcgggcgctccgagggcaac
ctgatggacggtctggcgcttcgaaacctggagctgtccacagaatccttcgatgcgcgg
atctcctccatcttcatcaagccttcccctcgatcgcttccggcgggcttcctgtctgtg
gaagaattgcggatggagggcgtcgccgtgcacgaccggaggccggaagagaaagagccg
ccggacttgagctggccttccgtaccgggctttctcggttccctgagaggcggaatcgct
tctctcgacatcagcaatatcgaataccgccgacttgaagagccgccggtccggatcgac
cgcattcaggggagtctggagtggaatgccggcatcctcgatttgaaaaatatccgcatc
aagtctccctggggggagcttcgcggggacgcttcggcgggctttatcatcccctttctg
aatctggaaacggcccttgacctgcaaagcgggggtggggacggtgtcgggaaattttcc
ttgaaagccggcttgaggaaaaccgcggcccccgagccgatcgctggggaagtctctctc
acagccgctgacatcggcggcagaaagacgggattgacgggcatcattgggctggcgaaa
cattccgtccatctgagggatgtccgtctgctcaggcccggactgaaaggagatatggct
ggcagcgccgtcgtgacgtttccggaaggagagccattttacagtattcgggtgaaggcg
tcccatctcgatctttccccggaaatttcctttcccacggacatcagcggtgagatcgat
ctgaagggcgttcccacggattacacagggtcgtattctctgaccaacacggggaaaacg
tgggcttcgactgtcctcagagggtcctttggcggcgacctggagaggctcaaactgacg
ctttcggaagggaaatggctggccggacgcgtttcgggcgacgtcgcggtcaactggaaa
gaaggcgtgcgcctgacggcagcggtggaaggaaccggtttgaatccggcggtattcgat
ccccaatggaaaggggcgttgaatgtaacggcccgcggacagctcggcatgaaagcggat
gcgccccccgatgcccgcgtccaggcctggatatcacgcagtcaactgctcggcagagat
cttacgggcgaagcggacgtgcgcctgcgcggcgatgatctcgatatcgctctactggat
gtcagggggcggcagttcgccgtgcgcgcttccggggcgctgaaagaacggatcgacttc
cgtgctgccgctggcgatctcggggaactgattccttccgcccggggacggctatccgcc
cagggctgggtccgcctgcgggacgggctgaccgcgttttccgcggaaggaagcgggaga
aatgtttcggttgaccgcttcgcggccgattccctttcctaccggatgacgctcgccgcg
gaaaaagaccggctgctggatgcggctgtgaacgcaaagagcctgaggtacgattcggtc
gagctctctgccgctgtcgtgcgggcgcggggcgccctttcgcgccaccggatttccata
gaagcgcgggcgccgcgggcaacggcggatgcctctcttgccggttcctacgcgtccggg
acatggcggggaacgatcgaaaaactctccggccgggacagatccggcccctggcggctc
ctgtcgccggctgagctgatgatctcccggcgtgccgtatccgtctcccctctggttctc
gccggcaacgccggggagcgtctggacctggcggcggatatgtttctgaatcccctgcag
ggacgtctgaacgcctcctgggctggaatccggctggagcgcatttcctcctggattccc
gatagcggtctttccgggaagacatcgggaaatctggaaacccgttttgcccgaggagat
gtggctctccttgccggcaaattcagctcctcggggaaggctgcaatcggggggcggccc
gtttccttcaaccgggcggaggctttgcttaattggggacgggaagggttggacgctcgg
ctggaagtttcccttgcgggcgaaggggtgattaacggacgtgcctcttcaccggctccc
gttcgcctggctcttcccgaccaggggaaattcgaaatggatgtccgggatctcgatcct
ggcctgttccatgcctggctgccttccggcgtaacggttgccggccgcgcggcgggtaaa
gtcgaggggaggctgctgcccggcagcgcctttgaactgtccggaaagttgaatgtctta
tcgggatcggcaacccggaaggacgaagaggggcagatttccatcggatttcggagcgcc
gccgttgacttttcctggagggacgctgatctgagaggcagggcgagcgctgagtttgtc
gattacggcagcctgcaggcggctttcagaattcctcttccggcgcggattcccgtcgtc
ccggacccgtcgggaaccgtggccgcatcgatccgcggccgactccgggaagcgggcatg
ctgaatgccgcctttccgggatttgtcgaagtggggaagggggaactcgatctcgccgtc
acggtcggcggcgcctggggcgatcccagggtggaggggcgtgtcgacatggcgaaagcg
ggggcctacctcccggccgccgggatcgagctgaaggatgtgagcttgaaggcgcgcatg
gaggggacaaagatcctgatcgattccctgagggcgaattccggccccggcagcatcgac
cttcaggcggaaatcgtcttgagtggcagccaggtgtcatcctattccggtacagtcaag
ggagaccggtttcagaccgtcaatctgccggaattgcagttgctgacaagtcccgatctc
cgttttgaaggcaatctggaaaaactggccgtgcgcggcagcgtttcggtgccccggatg
ctggctcttgcaggacaggggccgtccgtgatcacgccgagcagggacgtggttgtcgtg
gatgcgccgccctcaaggggaagaaagatgcccttcgctctcgatgtccgggttgccgtc
attcttggtgacgatgttcgcgtcaaggccgacggcgccaatctccagcttggcggaacg
gttgcaaccgcggcgacgggcccggaaaatatcagggcgcaggggactgtccggatcgtg
gatggcagttacagtgtgtacggtgtaacattgaaggtggagagcggccgcatcatcttt
gccgggccggccgacaccccgcaactcgatatcaccgccgcccgcaaggtcgaggatgtc
acggcgggagtgtttgtcggcgggacgatctcttcgccccgcatccgcctctactcccgt
cctgccatgcaggagccggaaattctttcctatctcgtgctcggccgcgcccttcaggga
gagggaaacgaaccggatctgtccctgctgctgcgcgcggccggctccattctgacgaaa
tccgaatctccttccgttatctcccagctgaagagccgactgggacttgaaggcgtggaa
gtcaaattcaccagggatacgtcggctgttgcgggccagcccggcacggcggcgacgcag
aacggtctgatggccggttccatggtctccatcggcaagtatctgacccccaggctttat
gtcagtttcggtcgctacctcttttcggagcagagcgtcgtcaagctgcgatacaaattt
tccgaaaagtgggaggtggaaacacacggcggaaccgtgagcggcgcggacatcttttac
aaaatcgagttccggtaa
DBGET
integrated database retrieval system