Syntrophus aciditrophicus: SYN_02459
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Entry
SYN_02459 CDS
T00346
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sat
Syntrophus aciditrophicus
Pathway
sat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SYN_02459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sat03400
]
SYN_02459
Enzymes [BR:
sat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SYN_02459
DNA repair and recombination proteins [BR:
sat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SYN_02459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
SR_plectin_7
Motif
Other DBs
NCBI-ProteinID:
ABC77662
UniProt:
Q2LUA1
LinkDB
All DBs
Position
1857158..1858558
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AA seq
466 aa
AA seq
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MSQRIISDRCTAMKGSITEILTVSELNEKIRDLLEARFDLLWVEGEVSNLRRPSSGHIYF
TLKDEKSQIRAVIFRFLPGSRPFRNNRLPFFDLEEGMQITCRARLAVYAPRGEYQLILDS
LEPRGTGALQKAYEQLKARLQAEGLFDASRKKPIPYLPRRIGVITSPTGAVIRDILNITA
RRFPSVSLVIAPVRVQGPEAPREIVQAIQDLHSLEEVDVLILARGGGSLEDLSAFNDESV
ARAIASSSLPVISAVGHETDFTIADFAADVRAPTPSTAAELAVPNRNDLTAWLAGTRSRL
YTLLIRSMTQRREQLVRCRERLKDPQRVITGLRLALDDHRERGRLIIQQRLSAEKQNILL
QRLRLQQAGPLRRIRDTRLNVEDMEKRLISSCRLNLDRARKSWTVSATRVDSLSPLAVLE
RGYSIARTLPGGRIIRDVAMLKIGDSLELRVRKGRLEAEVTRIIPE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
ttgtcacaaagaataatatctgataggtgcactgcgatgaagggaagtataacggaaata
ttaaccgtttcggaactgaatgaaaaaatccgggatcttctggaagcccggtttgatctg
ctctgggtggagggggaagtgtccaatttgcgccgcccctcctcgggacatatctatttt
acgctcaaggatgaaaaaagtcagattcgggcagtcatattccggtttttacccggatcg
aggcccttccggaacaatcgtctcccttttttcgaccttgaggaaggcatgcagatcacc
tgtcgagccagactggccgtctacgcgccgagaggagagtaccagctgattcttgactcg
ctggaaccccggggaaccggcgctcttcagaaggcgtatgaacagttgaaagcccgcctg
caggccgagggactttttgatgcctcccggaaaaaaccgattccctaccttccccggcga
atcggcgtgatcacctcccccacgggagccgtcatccgcgacatcctgaacatcacggca
agacgctttccctccgtttctctcgtgatcgctcccgtccgcgttcagggaccggaagca
cccagggagatcgttcaagccattcaggatctgcattcccttgaagaagtcgatgtcctc
attctggctcgcgggggaggatcgctcgaagatctatccgctttcaatgatgaaagcgtc
gcccgtgccatcgcctcgtcatctcttccggttatctccgcagtcggccatgagacggac
ttcactatcgccgactttgcagcggatgtccgtgcgcctacgccatccactgccgcggaa
ctggccgtgcccaacaggaacgatctgaccgcctggcttgcaggaacccggtcaagactt
tacacactcttaatccggagcatgacacaaaggcgggagcagctggtccgatgccgggaa
cggttaaaggacccacagcgcgtcatcacaggtttgcgtctcgccctggacgaccacagg
gaacgcggccggcttatcattcaacagcggctgtcagcggaaaagcagaatattctgctt
cagcgcctgcgtcttcagcaggcaggccccctccgcagaataagggacacccgtttgaac
gttgaggatatggaaaagcggctcatttcctcctgccggcttaatctggaccgggcgaga
aaaagctggaccgtttcggcgacacgcgtggactccctgagtccccttgccgttctggag
cgggggtacagcattgccaggacattgccgggaggtagaattataagggatgtcgccatg
ctgaaaatcggcgattccctggagcttcgggtgcgaaagggccgccttgaggcagaggtc
acgaggattattccggagtaa
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