Syntrophus aciditrophicus: SYN_02553
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Entry
SYN_02553 CDS
T00346
Name
(GenBank) exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
sat
Syntrophus aciditrophicus
Pathway
sat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SYN_02553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sat03400
]
SYN_02553
Enzymes [BR:
sat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SYN_02553
DNA repair and recombination proteins [BR:
sat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SYN_02553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABC77336
UniProt:
Q2LTC9
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All DBs
Position
1485852..1489193
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AA seq
1113 aa
AA seq
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MKGLNIIASNRMEVLAEKLADVLAGPLSSPLTPEIIVVQSRGMERWVSMQLAAFHGICAN
VRFPFPRRMIQDIFHAVLPGWEAEQDFNPELAAWRIMSLLTVASSRPGFEPLAAYLHDDS
QGLKRFQLSRQIARLFDQYLIFRPEMILNWEKRISDGDEYSWQADLWRLFVEEGKIVHPA
VLRLSLQDVMIRRGNQLSACLPERISIFGISYLPPFYLDIFLAVSSFMEVNFFLLNPSRE
FWFDIRSSREISREVKLVKGSVEKGMENEELSRSELYLEEGNSLLASLGTLGREFWSFLG
ECSGREEEYYVEPGETSLLHAIQSDILNLREGGGEADADGREVMFSEERSLQIHACHSPM
REVEVLHDSLLDLLEADPSLQPHDIVVMTPEIETYAPFITAVFETVDEDAPGLVDQPKIP
YHIVDRATISGRPVLGGLLKILDLPLGRFAAGEVLSLLEVAAIRNRFGLTEADIDQVSRW
VADSGIRWGIDERSRLREGLPEIATNSWQWGLKRMLLGYALPARNNELFSGIMPCETAEG
SEARLLGILAEFTERLFLTAESLSQDRTLSDWGSLLDDISDRFFLGDEDSEPDIRNLRQL
ASDLKNLQEKTGFPEKISLAIVRSFLQDRFQATGADGGFLSRGVTFCSLLPMRSIPFRVI
CLMGMNNGDYPRRPQTPSFDLMARHPRRGDRSRRNDDRYLFLEALLSARDTLYISYVGQS
MEDNSRIPPSVVVSELLDYVRRGFVLKDCNIDELLITYHPLQAFSPVCFTEESCRLFSYS
EENRKAANTLLKRSSLTSIPGAEAERLPEDPAMATQATIRDLIAFFRHPARFFLQRRLAV
FLGEADIVLEENEHFDVEGLDRYGIEQLLMEKEIETGHMEEVYPVLAAQGLLPHGAVGQS
RFDALKRDICHFVRSYKHILHSENIPPRDIDLEVAGFRLSGRLEGLGSRGLLHYRYATLK
GKDHLKLWIMHLLLHATDGPDGGDRESLLLGKNGLWRYSAIDEARCHLEKLISLYREGLC
RPLHFFPETSWAYAVKILRNGELSEEAEESAWDAARKAWEGDDFQRGEGVDHYNRLCFGD
FSPQDVEFQELSLNVYRPLLETQWKKKSNRKAP
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggattgaacattattgcaagcaaccgcatggaggttctggctgaaaagctggcc
gatgttctggccgggcctctttcttcaccgctgactccggaaatcattgtcgtccagagc
cggggaatggaacgttgggtttccatgcaactggccgcttttcacgggatctgcgccaat
gtccggtttccctttccaaggagaatgattcaggacattttccatgccgttctgccgggt
tgggaggcagaacaggatttcaatccggagcttgcggcctggcgtatcatgagcctgctg
accgttgcgtcatcgcgccctggttttgaacctctggcagcatacctccatgacgattct
caagggctgaaacgctttcaattgtcgcgtcagattgcccgacttttcgatcaatatctg
attttccgtccggaaatgatccttaactgggagaaaagaatttccgatggagacgaatat
tcctggcaggcggatctctggcggcttttcgtagaggagggaaagatcgtccacccggcg
gtactccgcctctctctgcaagatgtcatgatccggcggggaaatcaactctccgcttgc
ctgccggaacgcatctcgatatttggaatctcctatctgcctcctttttatctggatatc
tttcttgctgtttcgtctttcatggaggttaatttctttctcctgaatccatcccgtgaa
ttctggttcgacatccgttcctcccgggagatttcccgggaagtgaaactggttaagggc
agcgttgagaaaggaatggagaatgaggaattgtcccgtagtgagctctatctggaagag
ggcaacagtctgctggcctccctgggcactctgggacgggagttctggtcttttctgggc
gaatgttcaggccgggaagaggagtattatgtcgaaccgggcgaaacctcgcttctccac
gcgattcagtccgacattctgaatctccgggagggcggaggggaggccgatgcggacggc
cgagaggtcatgttttccgaggaaagatctctgcagattcatgcctgccacagtccaatg
cgcgaagttgaagtgcttcacgattccctgctggaccttctggaagccgatccatccctt
caaccccatgacatcgtggtcatgacaccggaaatcgaaacttacgcgcctttcattacg
gcggtattcgagacagtcgatgaggatgcgcccggtctggtcgatcagccgaaaatccct
taccatattgtcgatcgcgccacgatcagtgggagaccggttctgggaggactcctgaaa
atccttgatcttccattagggcggtttgccgccggcgaggtgctctcactactggaggtt
gccgctattcgcaaccggttcggcttgactgaagccgatatcgatcaggtttcgcgctgg
gttgccgacagcggcatccggtggggaatcgatgaacgcagccgtctgcgggaggggttg
ccggaaatcgccacaaattcctggcaatggggactgaagcgtatgctgctgggttatgcc
cttccggccagaaacaatgaacttttctccggaattatgccctgtgagacggcggaagga
agcgaggcccggctcctcggcattctggcggaattcacagaacggctgtttctgacagcg
gaaagcctgagtcaggatcgcacgctttcggactggggcagtctccttgacgatatctct
gatcgttttttcctgggagatgaggactctgaaccggatatccggaatctacgtcaactt
gcttccgatctcaaaaatcttcaggaaaaaaccggatttccggagaaaatcagccttgcc
atcgtgcggtccttcctccaggatcggtttcaggcaacgggagccgatggcgggtttctc
agccggggtgtaaccttctgctctctccttcccatgaggagcattcctttccgggtgatc
tgcctgatgggaatgaacaatggggactacccgagacggccgcagacgcccagtttcgac
cttatggccaggcacccccggcggggcgaccgttcccggaggaacgacgaccgctatctt
tttctggaagcccttctttccgcccgcgatacgctttatatcagttatgtagggcagagc
atggaagacaacagcagaatccccccatccgtggtcgtgagcgaacttctggattatgtc
cgccgcggatttgttttgaaagactgcaatatcgatgagttactgatcacataccatccc
cttcaggctttcagcccggtctgttttaccgaagaatcgtgccggctcttcagttattcc
gaagagaaccgcaaagcggcaaacaccctgctcaagcgttcgtccctgacttcgataccg
ggtgccgaagcggaaaggcttccggaagatccggcaatggctacgcaggcaaccattcgg
gatctgatcgccttcttccgtcatcccgcaagattttttctgcagagaagactggccgtc
tttctgggggaggcggacatcgtactggaggagaatgaacacttcgatgtagaggggctt
gaccggtacggcattgaacagcttctgatggaaaaggaaatcgaaacgggacacatggag
gaagtttatccggtgctcgccgcgcaggggctccttccccatggggctgtgggtcagtcc
cggttcgatgccttaaagcgcgatatttgccattttgttcgtagttataagcatattctg
cactcggaaaacattcctccccgcgacatcgatctggaagtggctggtttccgactctcc
ggtcgccttgaaggactcggttcgcggggtttgctccattatcgctacgcgaccctgaaa
gggaaggatcacctgaaactgtggattatgcatcttcttctgcatgcaacggacggcccc
gatggaggcgacagagaaagtcttcttctgggaaaaaacggattatggcgatattccgcc
atcgatgaagcccggtgtcaccttgaaaaactgatctccctttatcgggaagggttgtgt
cgccctcttcacttttttccggaaacctcctgggcctatgccgtaaaaatattaaggaac
ggagaactgtcggaagaagcggaagagtccgcctgggacgcggcaagaaaagcgtgggaa
ggagatgattttcagaggggcgaaggtgttgatcattacaaccgcctttgttttggggat
ttctccccccaggatgtggaatttcaggaattgtccctgaacgtctatagacctctgctc
gaaacgcaatggaagaaaaaatcaaatcgtaaagcgccatga
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