Syntrophus aciditrophicus: SYN_02971
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Entry
SYN_02971 CDS
T00346
Name
(GenBank) holliday junction DNA helicase
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sat
Syntrophus aciditrophicus
Pathway
sat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SYN_02971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sat03400
]
SYN_02971
Enzymes [BR:
sat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SYN_02971
DNA repair and recombination proteins [BR:
sat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SYN_02971
RecFOR pathway proteins
SYN_02971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_24
Mg_chelatase
nSTAND3
AAA_14
IstB_IS21
AAA_25
AAA_16
TsaE
RNA_helicase
AAA_22
AAA_3
DUF815
AAA_18
AAA_17
NTPase_1
NB-ARC
Rad17
AAA_28
Parvo_NS1
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ABC76621
UniProt:
Q2LRA8
LinkDB
All DBs
Position
748581..749603
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AA seq
340 aa
AA seq
DB search
MKRDDLVSPECMDGDNVYETTLRPHSIKEYVGQKKIKKTLPIFVEAAQKRKEALDHVLLY
GPPGLGKTTLALIIAREMGFNIKVTSGPVIERPGDLAAILTNLKDYDILFIDEIHRLPHS
VEEILYPAMEDFYIDIVIGQGPSARSMKLDIPKFTLVGATTRAGLLTSPLRDRFGISFRL
DYYAVEELTKIINRSASIMSIEIEHSGALEIAKRSRGTPRIANRLLKRVRDYAQVKGEGI
IKRAVAVHALEMLEIDDRGFDQMDRSILLSIIENYGGGPVGIDTLCATVGEEKTTIEDVY
EPYLIKEGYLQKTARGRIATKKAYEHFGKRKFEVGQKELF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagatgatctggtgagtcctgaatgcatggatggagataatgtttatgaaacg
acattacgtccccatagcatcaaggaatatgttggtcagaaaaaaataaagaaaactctg
cccatttttgttgaggcggcccaaaaaaggaaagaggccctcgatcatgtcctgctttat
ggacctcccggtttgggtaaaacaacgctggcgcttattattgccagagaaatgggattc
aatatcaaggtaacttcgggacctgttattgaacgtccgggagatctggcggcaattctg
acaaatctgaaagattatgacatcctcttcattgatgaaattcatcgacttcctcattcc
gtcgaagaaatcctgtacccggcgatggaagacttttatatcgacattgtgattgggcaa
gggccttccgcacgaagtatgaaattggacatcccgaagtttacattggtgggtgcgaca
acaagagccgggttacttacttcgccactgagagaccggtttgggataagtttcagactt
gattattatgctgttgaagaattgacgaagatcataaaccgttctgcaagcattatgtcc
attgaaatcgagcattcaggcgctctcgaaatagcaaaacgttcaagaggtacgccgaga
attgccaatcgtctccttaaaagggtcagagactatgcccaggtaaagggggaggggata
ataaaaagggctgtcgctgttcacgcgctggaaatgctggaaattgatgacagaggattt
gatcaaatggatcggagtattcttttgtccataatcgagaattacggtggcggaccagta
ggcattgacacattatgtgctacagtcggggaagaaaaaacgacgattgaagacgtttat
gagccttatctgataaaggaaggctatctacaaaagacggcacgcggcaggatagccaca
aaaaaagcgtacgaacatttcgggaaaagaaaattcgaagttggacaaaaggaattattt
taa
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