Streptomyces atratus: C5746_13460
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Entry
C5746_13460 CDS
T07374
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03086
RNA polymerase primary sigma factor
Organism
sata
Streptomyces atratus
Pathway
sata02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sata00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C5746_13460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sata03021
]
C5746_13460
Transcription machinery [BR:
sata03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C5746_13460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_28
LexA_DNA_bind
Sigma70_r4_2
KORA
PGM1_C
DUF2316
Motif
Other DBs
NCBI-ProteinID:
AXE77781
UniProt:
A0A2Z5JBP9
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All DBs
Position
complement(2972453..2973547)
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AA seq
364 aa
AA seq
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MQTRTLTETEHVSAIPAQNRAVRHPEAAVEPQTPPDPPEALMEELPEAPETPESRGRPET
AGPSSDLFRQYLREIGRIPLLCAADEVELARRVEAGLFAEERLASTPDPDTRLAVDLDRL
VVMGRMAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAVEKFDYARGYKFS
TYATWWIRQAMSRALADQARTIRVPVHVVELINRVVRVQRRMLQERGYEPTPEEVAEQLD
LTPERVGEVLRLAQEPVSLHAPVGEEEDVALGDLIEDGDAASPVESAAFLLLREHLEAVL
STLNERERKVVQLRYGLADGRPRTLEEIGRIFGVTRERIRQIESKTLNKLRDHAFADQLR
GYLD
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacccggaccctgaccgaaaccgagcatgtctcggccatacccgcgcagaaccgg
gccgtgcgccatccggaggccgcggtggagccgcagacaccacccgacccacccgaggca
ctcatggaggagctgccggaggcgcccgaaacgccggagtcgcggggccgcccggagacc
gccggcccgtcctccgatcttttccgccagtatctgcgggagatcggccggattccgctg
ctctgcgccgccgacgaggtggagctcgcccgccgcgtcgaggccggtctcttcgccgag
gaacggctcgcgagcaccccggacccggacacccgactcgccgtcgatctcgaccggttg
gtggtcatggggcggatggcgaagcgccgtctcatcgaggccaacctccgcctcgtcgtc
tccgtcgccaaacgctatgtcggccgcgggctgaccatgctcgatctggtccaggaggga
aacctcggactgatcagggcggtcgagaagttcgactacgcccggggctacaagttctcg
acatacgcgacctggtggatccgtcaggccatgtcccgcgccctcgccgaccaggcgcgg
accatacgggtcccggtccatgtcgtcgaactgatcaaccgcgtcgtacgggtgcagcgc
cggatgctccaggagcgcggctacgagccgacgcccgaggaggtcgccgaacagctcgac
ctcaccccggaacgggtcggcgaagtcctgcggctcgcccaggaacccgtctcgctgcac
gccccggtcggcgaggaggaggacgtcgccctcggtgacctgatcgaggacggggacgcc
gcgtccccggtcgagtcagccgcgttcctgctgctgcgcgagcacctggaagcggtgctc
tccactctgaacgagcgtgagcggaaggtggtccagctgcgctacgggctggccgacggg
cggccccgcacacttgaggagataggcaggatcttcggcgtgacacgcgagcgcatccgc
cagatcgagtccaagaccctcaacaagctgcgggaccatgccttcgccgaccagcttcgc
ggctacctcgactga
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