Streptomyces atratus: C5746_16745
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Entry
C5746_16745 CDS
T07374
Name
(GenBank) B/F/G family RNA polymerase sigma-70 factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sata
Streptomyces atratus
Brite
KEGG Orthology (KO) [BR:
sata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sata03021
]
C5746_16745
Transcription machinery [BR:
sata03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C5746_16745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_Crp_2
HTH_23
MarR_2
HTH_24
HTH_3
HTH_10
DUF7343
MarR
Sigma70_ECF
Apolipoprotein
IF2_N
DUF1492
Motif
Other DBs
NCBI-ProteinID:
AXE82846
UniProt:
A0A2Z5JQZ8
LinkDB
All DBs
Position
3720271..3721242
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AA seq
323 aa
AA seq
DB search
MSPRLDGPRTHDATSACPQGLTHSDSPAANAGDGTRNSSTSSTAVDSVDDYGVTDGLEGL
PEIPPYDEVGPLDARALSKTLFARLESLEEGTHEYSYVRNTLVELNLALVKFAASRFRSR
SEPMEDIIQVGTIGLIKAIDRFELSRGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQ
ELRLDLAKAGDELAQKLDRSPTVGELADRLGITNDEVVEGMAASNAYTASSLDAKPEEDE
HESALADRIGYEDHGLEGIEYVESLKPLIASLPGRDRTILSLRFVANMTQSEIGEELGIS
QMHVSRLLSRTLVKLRKGLTLEE
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacggaccgcgtacccacgatgcgacgtcagcatgtcctcaggga
ctgacccactcagactcccccgccgcgaacgccggagacggcacgcgcaacagcagcacc
agcagcaccgccgtcgacagcgtcgacgactacggcgtcaccgacggtctcgaaggactt
cccgagatcccgccctacgacgaagtggggccactggacgccagggccctgtcgaagacg
ctcttcgcgcggctcgaatccctcgaagagggcacccacgagtactcgtacgtccgcaat
acgctcgtcgaactgaatctggccctggtcaagttcgccgcctcccggttccgctcccgc
agcgaaccgatggaggacatcatccaggtcggcaccatcggcctgatcaaggcgatcgac
cgcttcgagctcagccggggcgtggagttcccgacgttcgcgatgccgaccatcgtcggc
gagatcaagcgcttcttccgcgacaccagttggtccgtgcgcgtaccgcgccgactgcag
gagctgcggctcgacctggccaaggcgggcgacgagctcgcccagaagctggatcgttca
cccactgtgggcgagctcgccgaccgcctcggcatcaccaacgacgaggtcgtcgagggc
atggcggcgagcaacgcgtacaccgcgagttcgctggacgccaagcccgaggaggacgag
cacgaaagcgcgctggcggaccgtatcggctacgaggaccacgggctcgaaggcatcgag
tacgtcgagtccctgaagccgctgatcgcctcgctgccgggccgtgaccgcaccatcctc
tcgctccggttcgtcgccaatatgacgcagtcggagatcggtgaggagctgggcatctcc
cagatgcatgtgtcgcggctgctctcccgcactctggtcaagctcagaaagggcctgacg
ctggaggagtga
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