Streptomyces atratus: C5746_23115
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Entry
C5746_23115 CDS
T07374
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sata
Streptomyces atratus
Pathway
sata03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sata00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
C5746_23115
09124 Replication and repair
03420 Nucleotide excision repair
C5746_23115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sata03021
]
C5746_23115
03400 DNA repair and recombination proteins [BR:
sata03400
]
C5746_23115
Enzymes [BR:
sata01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C5746_23115
Transcription machinery [BR:
sata03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
C5746_23115
DNA repair and recombination proteins [BR:
sata03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
C5746_23115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
IMD
ETAA1
Motif
Other DBs
NCBI-ProteinID:
AXE79329
UniProt:
A0A2Z5JGC7
LinkDB
All DBs
Position
complement(5042184..5043827)
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AA seq
547 aa
AA seq
DB search
MTGPLIVQSDKTLLLEVDHDQADACRRAIAPFAELERAPEHIHTYRLTPLGLWNARAAGH
DAEQVVDALVQYSRYPVPHALLVDIAETMARYGRLTLSKHPVHGLVLTSTDRPVLEEILR
SKKVQPLVGARIDPDTVAVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHPIELAEDGWA
LRPYQKQAVEGFWHGGSGVVVLPCGAGKTLVGAGAMAQAKATTLILVTNTVSARQWKHEL
VKRTSLTEDEIGEYSGTRKEIRPVTIATYQVLTTRRKGIYPHLELFDSRDWGLVIYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDSERLAYATAETEEKYRFCATTATKRKVTEALVRKHRGEQTLVIGQYIDQ
LDELGEHLNAPVIKGETSNAQREKLFDAFREGELSVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHEARFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDA
DELLTDN
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggacccctcatcgtccagagcgacaagacactgctcctggaagtcgaccacgat
caggccgacgcctgccgtcgggcgatcgcgcccttcgccgagctggagcgggcacccgag
cacatccacacctaccggctgaccccgctcgggctgtggaacgcgcgcgccgccgggcac
gacgccgagcaggtcgtcgacgcgctcgtgcagtactcgcgctatcccgttccgcacgcg
ctgctcgtcgacatcgccgagacgatggccaggtacggccgcctcaccctctccaagcat
ccggtccacggtctggtgctgacctccacggaccggcccgtgctggaggagatcctccgg
tcgaagaaggtccagccactggtcggggcacggatcgacccggacaccgtggccgtgcac
ccctcggagcgcgggcagatcaagcagacgctgctgaagctgggctggccggccgaggac
ctcgcgggttacgtggacggcgaggcgcaccccatcgagctcgcggaggacggctgggcg
ctgcggccgtaccagaagcaggccgtcgaggggttctggcacggcggctcgggtgtcgtc
gtgctgccctgcggtgcggggaagacgctggtcggggcaggtgcgatggcccaggccaag
gcgaccacgctgatcctggtgacgaacaccgtctcggcccggcagtggaagcacgagctg
gtgaagcggacctcgctgaccgaggacgagatcggcgagtacagcggtacgcgcaaggag
atccggccggtcaccatcgccacttaccaggtgctgacgacccgccgcaagggcatctac
ccgcacctggagctgttcgactcccgcgactggggtctggtgatctacgacgaggtgcat
ctgctgcccgcgcccgtcttcaagttcaccgccgacctgcaggcccggcgccgcctcggc
ctcaccgcgacgctggtgcgtgaggacggccgcgagtcggacgtcttctcgctgatcggg
cccaagcggttcgacgccccgtggaaggagatcgaggcgcagggctacatcgcgcccgcc
gactgtgtcgaggtacgggtcaatctgacggactcggagcggctcgcgtacgcgaccgcg
gaaaccgaggagaagtaccggttctgtgcgacgaccgcgacgaagcggaaggtgacggag
gcgctggtacgcaagcaccggggcgagcagacccttgtcatcgggcagtacatcgaccag
ctcgacgagctgggtgagcatctgaacgccccggtgatcaagggcgagacgagcaacgcc
cagcgcgagaagctcttcgacgcgttccgggagggcgagctcagcgtcctcgtggtgtcg
aaggtcgcgaacttctccatcgacctgccggaggcgaccgtcgccattcaggtgtcgggt
acgttcggctcgcggcaggaggaggcgcagcggctcggccgggtgctgcggccgaaggcc
gacgggcacgaggcgcggttctactcggtggtcgcccgcgacacgatcgaccaggacttc
gcggcgcaccgccagcgcttcctggccgagcaggggtacgcctaccggatcgtggacgcg
gacgagctgctgaccgacaactga
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integrated database retrieval system
