Streptomyces atratus: C5746_24660
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Entry
C5746_24660 CDS
T07374
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sata
Streptomyces atratus
Pathway
sata03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sata00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C5746_24660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sata03021
]
C5746_24660
03400 DNA repair and recombination proteins [BR:
sata03400
]
C5746_24660
Enzymes [BR:
sata01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C5746_24660
Transcription machinery [BR:
sata03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C5746_24660
DNA repair and recombination proteins [BR:
sata03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C5746_24660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
AXE79571
UniProt:
A0A2Z5JGS5
LinkDB
All DBs
Position
5353159..5357058
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRTWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITFVDEERRTRDLPSLEAHVSVERQQVENRRDADLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWSRFKNLKVQDLEGDELL
YRELRDRFGTYFDGCMGAAALQKRLESFDLDEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNKPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDEEERKVVGQ
GRSFGSTAEAIMAFDARELSLQAKVDIRFPVGTIPPRGWVPPVAEEGEQEYQQGDTFRLR
TSLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFYWAT
RSGVTVAISDVVVPEAKKAIVAGYEAQDEKVQKQYERGLITKDERTQELIAIWTKATNEV
AEAMNANFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLT
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLKLKIAVKG
ADGVLRKTEDVETSVYARMLAEDVVVDGKVIAPANVDLGDVLIDALVGAGVEEVKTRSVL
TCESAVGTCAFCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEAAGRIRIEETEKTKKIVVTPDDGSDETPFPISKRARL
LVGEGDHVEVGQKLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVTEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLARYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctgcggatcggccttgccaccgcggacgacatc
cggacctggtcccacggcgaagtgaagaagccggagaccatcaactaccgcacgctcaag
cccgaaaaggacggtctcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgtgagcgttgtggcgtc
gaggtcacgcgcgccaaggtgcgtcgtgagcgcatgggccacatcgagcttgccgctccc
gtcacccacatctggtacttcaagggcgtcccgtcgcgcctcggctacctgctggatctc
gcgccgaaggacctcgagaaggtcatctacttcgccgcgtacatgatcacgttcgtggac
gaggagcgccgtacgcgtgacctgccctcgctggaggcgcacgtctccgtcgagcgtcag
caggtcgagaaccgtcgcgacgccgaccttgaggcccgcgccaagaagctcgagaccgac
ctggccgagctcgaggccgagggtgccaaggccgacgtgcgccgcaaggtgcgcgaaggt
gccgagcgtgagatgaagcagcttcgcgaccgtgcgcagcgcgagatcgaccgcctcgac
gaggtgtggagccgcttcaagaacctcaaggtccaggacctggagggcgacgagctgctc
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggctgcatgggtgccgctgct
ctgcagaagcgcctggagtcgttcgacctcgacgaggaggccgagcgtctccgcgagatc
atccgtaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gcgttcctgcagaccagtaacaagcccaagggcatggtgctcgactgcgtgccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtgatcaaccgcaacaaccgcctcaagcgtctccttgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcggatgctgcaggaggctgtcgacgcg
ctgttcgacaacggccgccgcggtcgcccggtcaccggtcccggtaaccggccgctcaag
tccctcagcgacatgctgaagggtaagcagggtcgtttccgtcagaaccttctcggtaag
cgtgtggactactccgcgcgttccgtgatcgtcgtcggtccgcagctgaagctgcaccag
tgcggtctgcccaaggccatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtcgacctgaatcacgcgcagaacatcaagtcggccaagcgcatggtcgagcgtggccgc
accgtggtgtacgacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcaccgaccctgcaccgcctcggcatccaggccttcgagccgcagctcgtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctctccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgaagccggccgacggtcgccccgtcaccatgccgacccaggac
atggtgctgggcctgttcttcctcaccacggacgaggaggagcgcaaggtcgtcggccag
ggccgttccttcggttccacggccgaggcgatcatggccttcgacgcccgcgagctgtcg
ctccaggcgaaggtcgacatccgcttcccggtgggcaccatcccgccgcgtggctgggtg
ccgccggtcgccgaggagggcgagcaggagtaccagcagggcgacacgttccggctgcgt
acgtccctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tactccgtcggcaagaagcagctctccgagatcgtcaacgacctcgccgagcgctacccc
aaggtcatcgtggcggcgacgctcgacaacctgaaggcggcgggcttctactgggcgacc
cgttccggtgtcaccgtggccatctccgacgtcgtggtccccgaggccaagaaggcgatc
gtcgccggctacgaggcgcaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggacgagcgcacgcaggaactcatcgcgatctggaccaaggcgaccaacgaggtt
gccgaggcgatgaacgcgaacttccccaagacgaaccccatcttcatgatggttgactcg
ggtgcccgaggaaacatgatgcagatgcgtcagatcgccggtatgcgtggtctggtgtcc
aacgccaagaacgagaccatcccgcgtccgatcaaggcgtccttccgtgagggcctcacc
gttctggagtacttcatctccacgcacggtgcccgtaagggtctggcggacaccgccctg
cgtaccgccgactcgggttacctgacccgtcgtctggtggacgtctcgcaggacgtgatc
attcgcgaggaggactgcggcaccgaccgtggcctcaagctgaagatcgccgtcaagggt
gcggacggtgtgctccgcaagacggaggacgtcgagacctcggtctacgcccgcatgctc
gccgaggacgtcgtcgtcgacggcaaggtcatcgcgcctgccaacgtcgacctcggtgac
gtcctgatcgacgccctggtgggcgccggcgtcgaggaggtcaagacccgttcggtcctg
acctgtgagtccgcggtcggcacctgtgccttctgctacggacgctcgctcgccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggtacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
cagggtctgccccgtgtcgtcgagctcttcgaagcccgtacgcccaagggtgtcgccccg
atctcggaggcggccggccgcattcgtatcgaggagaccgagaagaccaagaagatcgtc
gtcaccccggacgacggcagcgacgagacgccgttcccgatctcgaagcgtgcccgtctg
ctcgtgggcgagggcgaccacgtcgaggtgggccagaagctcaccgtgggtgccaccaac
ccgcacgacgtgctgcgcatcctcggtcagcgcgcggtccaggtccacctggtcggcgaa
gtccagaaggtgtacaactcgcagggcgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctgcgccgcgtgacgatcatcgagtccggcgacgcggagctgctgccg
ggcgagctcgtcgagcggtcgaagttcgagaccgagaaccgtcgtgtggtcaccgagggc
ggtcaccccgcctccggccgtccgcagctgatgggtatcaccaaggcctcgctcgccacc
gagtcgtggctctcggcggcgtccttccaggagacgaccagggttctgaccgacgcggcg
atcaacgccaagtcggactccctgatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggtctggcccgctaccgcaacatccgggtcgagccgaccgaggaa
gccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgccgttcggc
acgggctccggccaggccgttccgctggaggactacgactacggtccgtacaaccagtaa
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